Citrifermentans bemidjiense: Gbem_1665
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Entry
Gbem_1665 CDS
T00749
Symbol
yhaM
Name
(GenBank) 3'-to-5' exonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbm03019
]
Gbem_1665 (yhaM)
Messenger RNA biogenesis [BR:
gbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Gbem_1665 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACH38683
UniProt:
B5E9E1
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All DBs
Position
1931435..1932601
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AA seq
388 aa
AA seq
DB search
MKKKCVAEIKDRDLVEAVFLVKEKIVAMAKNGKPYLTLKLMDKSGEVDAKVWDNADQVGA
LFDRNDFLEVRAKASVYLGKMQLIVSELKKVPDDSVDLADFLPETDRDIEAMVEELHALV
AGVKDPDLARLLSSFFHDPELLAQYSVAPAAKGMHHVYLGGLLEHSLAVAKLVDAMVPLY
PGLNRDLLVAGALLHDVGKVREMTYLRCFDYSDEGKLIGHITIGAEMLHERITALPGFPA
ELAMLLKHMILSHHGQYEYGSPKRPKTLEATILNYLDDLDSKINGIRTHIRKEPDNPSRW
TSYHRLYDRYFFKENCLPEEELELSPAAGLEPSELMPQTVEAPVPVPSPSSAPEQGAPRR
ERQEAPRAGQERKSFSNNPFAALKNGKE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagaaatgcgttgccgagataaaggaccgcgacctcgtggaagcggtcttcctg
gtcaaggagaagatcgtggccatggccaagaacggcaagccgtacctcaccctgaagctt
atggacaaaagcggcgaggtcgacgccaaggtctgggacaacgcggaccaggtgggggcg
cttttcgatcgcaacgacttcctggaggtgcgcgccaaggcgagcgtctacctggggaag
atgcagctgatcgtctcggagctgaagaaggttcccgatgactcggtggatctggcggat
tttcttcccgaaaccgaccgggacatcgaggcgatggtcgaggagctgcacgccctcgtc
gccggcgtgaaggaccctgacctagccaggcttttgtcctccttcttccacgaccctgag
cttttggcccagtacagcgtcgcccccgcggccaaggggatgcaccacgtctatctcggg
gggcttttggagcactcgcttgccgtggcgaagctggtagacgccatggtcccgctctac
ccggggctgaaccgggacctcctcgtcgccggggcgcttttgcacgacgtgggtaaggtg
cgggagatgacctacctgcgctgcttcgactactcggacgaggggaagctgatcggccac
atcaccatcggggccgagatgctgcacgagcggatcacggcgctgccggggtttccggcc
gagctcgccatgctcttgaagcacatgatcctgtcgcatcacggccagtacgagtacggc
tccccgaagcgcccgaagacgctggaggcgaccatcctgaactacctggacgatctcgac
tccaagatcaacggcatccggacccacatccgcaaggaacccgacaacccctcgcgctgg
acctcgtaccaccgcctctacgaccgctacttcttcaaggagaactgcctgccggaggag
gagctggaactctccccggcggcaggcctggagccgtccgagctgatgccgcagacggtg
gaggcgccggtgccggtaccgtccccctctagcgcgccggagcagggagcgccgcgccgg
gagcgccaggaggccccccgcgctggccaggagcgcaagagcttcagcaacaaccctttc
gccgcgctgaaaaacggcaaggaataa
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