Citrifermentans bemidjiense: Gbem_1900
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Entry
Gbem_1900 CDS
T00749
Symbol
carB
Name
(GenBank) carbamyl-phosphate synthase, large subunit, glutamine-dependent
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00220
Arginine biosynthesis
gbm00240
Pyrimidine metabolism
gbm00250
Alanine, aspartate and glutamate metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Gbem_1900 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Gbem_1900 (carB)
00220 Arginine biosynthesis
Gbem_1900 (carB)
Enzymes [BR:
gbm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Gbem_1900 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
RimK
ATP-grasp_5
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
ACH38914
UniProt:
B5EB53
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All DBs
Position
2200142..2203390
Genome browser
AA seq
1082 aa
AA seq
DB search
MPKRTDIKKILIIGAGPIVIGQACEFDYSGTQACKALKEEGFEVVLLNSNPATIMTDPDF
ADFTYIEPVTPEILAAIIEKERPDALLPTLGGQTALNTAVAVAENGTLEKFGVELIGAKL
PAIKKAEDRTLFKEAMVRIGLDVPRSGLAHNYQEAMEVIKFVGFPAIIRPSFTLGGTGGG
IAYNMEEYERMSMAGIEASPTDEILVEESLIGWKEYELEVMRDTADNVVIICSIENFDAM
GVHTGDSITVAPAQTLTDKEYQILRDASLKIIREIGVDTGGSNIQFGTNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITKETPACFEPTIDYVVTKIPR
FTFEKFPAADATLTTQMKSVGEVMSIGRTFKESFQKALRSLEIGSCGFESKFFGVGGDTR
RALTEKERNLLNDKLRTPNCDRLWYVGDAFRCGMSVEEIYALTAIDPWFLNNIRQIIEME
EELKQINIKNESGEKLHDILWDAKRYGFSDKFLSQLWKITEAEVRQLRLSVGVKPVFKRV
DTCAAEFVAHTPYLYSTYEEECEAEPTDKKKIIILGGGPNRIGQGIEFDYCCVHGVFALS
EDGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLNIVDVEKPTGVIVQFGGQTPLKL
AVALEKAGVPIIGTSPDAIDRAEDRERFQEMLQKLKLRQPENGTARSFEESEVVAERIGY
PVVVRPSYVLGGRAMEIVYDVDNLRRYMHTAVQASPEHPILIDKFLDEAIEIDVDALCDG
QVAVIGGIMEHIEEAGIHSGDSACSLPPYSISKEIVEEIRRQTKMMALELNVKGLMNVQF
AVKGNDIYIIEVNPRASRTSPFVSKATGRPLAKIAARVMAGKTLAELGVTDEIVPVHISV
KESVFPFAKFPGVDTILGPEMKSTGEVMGIGDTFAKAYAKAQMGANVKLPTSGKVFISVK
DTDKKHIVSAAKRLYDQGFELVATRGTASYLQEKGIPVQVVNKVIEGRPHIVDAIKNNEI
CMVINTTHGAQAVADSYSIRRNTLINNVAYYTTASGARAAVDGIIAMSKSKLEVNSIQHY
LK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcacagacatcaagaagatcctcattatcggcgcaggcccgatcgtcatc
ggccaggcgtgcgagttcgactactccggtacccaggcctgcaaggcgctcaaggaagaa
gggttcgaggtggtgctcctgaactccaacccggctaccatcatgacggatccggacttc
gccgacttcacctatatcgaaccggtcaccccggagatcctcgcggcgatcatcgagaag
gagcgccccgacgcgctgctcccgaccctgggggggcagacggcgctgaacacggccgtg
gcggtagcggaaaacggcaccctggagaagttcggggttgagctgatcggcgcgaaactg
ccggccatcaagaaggctgaggaccgcaccctgttcaaggaggccatggtgagaatcggc
ctcgacgtgccgagatcgggtctcgcccacaactaccaggaggcgatggaggtcatcaag
ttcgtcggcttcccggccatcatccgtccttccttcaccctggggggcaccggcggcggc
atcgcctacaacatggaagagtacgagcgtatgtccatggccggcatcgaggcgtcgcct
accgacgagatcctggttgaggagtcgctgatcggctggaaggagtacgaactggaggtg
atgagggataccgccgacaacgtggtcatcatctgctccatcgagaacttcgacgctatg
ggcgtgcacaccggcgactccatcacggtggcgcctgcacagaccctcaccgacaaggaa
taccagatcctgcgcgacgcctcgctgaagatcatccgcgagatcggcgtcgacaccggc
ggctccaacatccagttcggcaccaatccgaaaaacggccgactgatcgtcatcgagatg
aacccgcgcgtctcccgctcctcggcgctcgcctcgaaagcgaccggcttcccgatcgcg
aagatcgccgccaaactcgccgtcggctacaccctggacgagatcaccaacgacatcacc
aaggagacgccggcctgcttcgagccgaccatcgactacgtggtcaccaagatcccgcgc
ttcaccttcgagaaattccccgctgccgacgccaccctcaccacccagatgaagtcggtg
ggcgaggtcatgtccatcggccgcaccttcaaggagtccttccagaaggcgctccgctcg
ctggagatcggctcctgcggcttcgagtcgaagttcttcggggtaggcggcgacacccgc
cgcgcgctcaccgaaaaagagcgcaacctcctgaacgacaagttgaggacccctaactgc
gaccgcctctggtacgtaggcgacgccttccgctgcggcatgagcgtggaggagatctat
gcccttaccgccatcgacccctggttcctgaacaacatccgccagatcatcgagatggag
gaggagctcaagcagatcaacatcaagaatgaatccggcgaaaagctgcacgacatcctc
tgggacgcgaaacgctacgggttctccgacaagttcctctcccagctctggaagataacc
gaagccgaggtgcgccaactgcgcctgtcggtcggggtcaagccggtctttaaaagggtc
gacacctgcgcagccgagttcgtggcacacaccccatacctctactccacctacgaggag
gagtgcgaggccgagcccaccgacaagaagaagatcatcatcctcggcggcggacccaac
cgaatcggccagggtatcgagttcgactactgctgcgtgcacggcgtattcgccctctcc
gaggacggctacgagaccatcatggtcaactgcaacccggagaccgtttccaccgactac
gacacctcggaccgcctctacttcgagccgctcaccttcgaggatgtgctgaacatcgtg
gacgtcgagaagccgaccggcgttatcgtgcagttcggcggccagactccgttgaaactc
gccgtggctcttgagaaggcgggggttcccatcatcggcacctcgcccgacgccatcgac
cgcgccgaagaccgcgagcgcttccaggagatgctgcaaaagctcaagctcaggcagccc
gaaaacggcaccgcccgctccttcgaggagtccgaggtggtcgccgagcgtatcggctac
cctgtcgtggtgcgcccctcctacgttctcggcggacgcgccatggagatcgtgtacgac
gtggacaacctgcgccgctacatgcacaccgcggtacaggcttcgcccgagcacccgatc
ctgatcgacaagttcctggacgaggcgatcgagatcgacgtcgacgccctttgcgacggc
caagtcgccgtcatcggcggcatcatggagcacatcgaggaggcgggtatccactccggc
gactcggcctgctcgctgccgccttactccatctccaaggagatcgtcgaggagatcagg
cgccagaccaagatgatggcgctggagctgaacgtaaaggggctcatgaacgtgcagttc
gccgtcaaggggaacgacatctacatcatcgaggtcaacccccgcgcctcgcgcacctcg
cccttcgtctccaaggcgaccggcaggcctttggcgaagatcgccgcgcgcgtcatggcg
ggcaagaccctggccgagctgggggttaccgacgagatcgtgccggtccatatctcggtc
aaggaatccgtcttccccttcgccaagttccccggcgtcgataccatcctgggaccggag
atgaagtcgaccggcgaggtcatggggatcggcgacaccttcgccaaggcgtacgccaag
gcgcagatgggggccaacgtgaagctcccgacttccggtaaagtgttcatttcagtgaag
gacacggacaaaaaacatattgtcagcgctgcaaaaagactgtatgatcagggcttcgaa
ttggttgctacgcgcggcacggcgagttatctgcaggaaaaagggatccccgttcaggta
gtaaacaaggtaatcgaaggacgcccccacatagtcgatgcgatcaagaacaacgagatc
tgcatggtcatcaacaccacccacggtgcgcaggccgttgccgattcctactcgattcgc
aggaacactctgatcaacaacgtcgcttactacaccacagcctccggcgcgagagctgcc
gtagacggtatcatagcgatgtccaagtcgaagctggaagtcaactcgatccagcactac
ttgaaataa
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