Citrifermentans bemidjiense: Gbem_2050
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Entry
Gbem_2050 CDS
T00749
Name
(GenBank) magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Gbem_2050
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GFIT
Motif
Pfam:
TatD_DNase
Radical_SAM
Amidohydro_1
GHL6
Motif
Other DBs
NCBI-ProteinID:
ACH39063
UniProt:
B5ECM8
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Position
complement(2362993..2364369)
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AA seq
458 aa
AA seq
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MELIDSHAHIYGKEYAADFEEMMERAAEAGVGTIVAVGADLESSQEALALAGARENVYCS
VGIHPHDADRVTERCYELVREMALSSPKVVAIGEIGLDFFRDRSSRENQEEVFRRFIRMG
RELSLPLIIHDRDAHDRIMAILREEKAGEVGGVLHCFSGDLAMAQECIELGFKISIPGTV
TYPSNEALREVVRGVKIEQLMVETDAPYLTPVPHRGKRNEPAFVRLTAERVAQVKGLSPE
DVGRITSFNTRKLFGIPQPAEQDTIAYMIRNSLYLNITNRCSNRCTFCPKFDDFAVKGHE
LKLSHEPNFAEVMAAVDRASGFEEVVFCGYGEPLVRLDLVKEVAAELKRRGIKVRINTDG
QANLVHGRNILPELAGLVDVLSVSLNAANAEDYQRLCNTPFGAAGFQGVCDFLREAPKHV
PQVTASAVTVPGLDVGKVRELALSLGVDYREREYAEVG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatcgacagccacgcgcacatatatggcaaggagtacgcggccgatttcgag
gagatgatggagagggccgcggaggctggagtcggcaccatcgtggcggtgggagccgac
ctggaatctagccaggaagcgctcgcccttgccggggcgcgcgaaaacgtctactgctcg
gtcggcattcatccgcacgacgcggaccgggtgaccgagcgctgctacgaactggtccgc
gagatggcgctctcaagccccaaggtggtcgccatcggcgaaatcggcctcgacttcttc
agggaccgctcctcgcgcgaaaaccaggaggaggtcttccggcgcttcatcaggatgggg
cgcgaattgtctctgccgctgatcatccacgaccgtgacgcccacgacaggatcatggcg
atcctcagggaggagaaagccggcgaggtaggaggcgtgctgcactgcttttccggcgac
ctcgccatggcgcaggagtgcatcgagctcggattcaagatctccatcccggggacggtc
acctacccctccaacgaggcgctcagggaagtggtgcgcggggtaaagatcgagcagctc
atggtggagacggacgccccctacctgacgccggtgccgcaccgcggcaagaggaacgag
ccggccttcgtgcggcttacggccgagagggtggcgcaggtcaaggggctttcccccgag
gacgtcggcaggatcacctcgttcaacaccaggaagctcttcgggatcccgcaaccggcc
gagcaggacaccattgcctacatgatccgcaactcactctacctgaatatcaccaaccgc
tgctcgaaccgctgcaccttctgccccaagttcgacgatttcgcggtgaagggtcatgag
ctgaagctctcccacgaaccgaacttcgccgaggtgatggctgcggtagacagggcctcc
ggtttcgaagaggtggttttctgcggctacggcgaaccgctggtccggctcgacctggtg
aaggaggtggctgccgaattaaagcgtcgcggcatcaaggtccggatcaacacggacggg
caggcgaacctcgtgcacggcaggaacatcctccccgaactggcaggccttgtggacgtc
ctctcggtgagcctcaacgccgccaacgccgaagattaccagcggttgtgcaataccccc
ttcggagcggcaggcttccagggtgtctgcgatttcctcagggaagcgcccaagcacgtg
cctcaggtgacggcaagcgcagtaacggtgccgggactggatgtcggaaaggtgcgggaa
ctggcgctgtcgctgggagtggattaccgcgagagggagtacgcggaggtaggttga
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