Citrifermentans bemidjiense: Gbem_2060
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Entry
Gbem_2060 CDS
T00749
Symbol
ihfB-1
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_2060 (ihfB-1)
03036 Chromosome and associated proteins [BR:
gbm03036
]
Gbem_2060 (ihfB-1)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_2060 (ihfB-1)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Gbem_2060 (ihfB-1)
Chromosome and associated proteins [BR:
gbm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Gbem_2060 (ihfB-1)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Gbem_2060 (ihfB-1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
ACH39073
UniProt:
B5ECN8
LinkDB
All DBs
Position
2373387..2373662
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIESLAAKKTLSFKKAEEVVNAVFASMTDALLSGDRIEIRGVGSFVVKEYDAYTG
RNPKTGESISVKAKKLPFFKVGKELKEKVSS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcggaactcattgaatctctcgccgcaaagaaaaccctctccttcaagaag
gccgaggaggtggtcaacgcagtcttcgcctcgatgaccgacgcccttttatccggcgac
aggatcgagatcaggggggtcggaagcttcgtggtgaaagagtacgacgcctacaccggt
agaaatccaaagacaggcgaatccatttccgtcaaggcgaagaagcttcccttcttcaag
gtcggtaaagaactgaaagagaaagtctccagctag
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