Citrifermentans bemidjiense: Gbem_2181
Help
Entry
Gbem_2181 CDS
T00749
Symbol
fdnG-3
Name
(GenBank) cytoplasmic formate dehydrogenase, major subunit, selenocysteine-containing
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00630
Glyoxylate and dicarboxylate metabolism
gbm00680
Methane metabolism
gbm01100
Metabolic pathways
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Gbem_2181 (fdnG-3)
09102 Energy metabolism
00680 Methane metabolism
Gbem_2181 (fdnG-3)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Gbem_2181 (fdnG-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molybdop_Fe4S4
Molydop_binding
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ACH39193
UniProt:
B5EDJ7
LinkDB
All DBs
Position
complement(2539534..2542800)
Genome browser
AA seq
1088 aa
AA seq
DB search
MSKKWSLLKWPALRQIAELDPLGLGESAMSERTRALKPRTADADRVVDSVCPYCGVGCGQ
KVYVKDGKIMDIEGDYDSPISLGALCPKGSASSQLVAGTHRVKKVLYRRPYGTQWEELPL
QKAMEMVADRVKKTRDETWEEQNKDGHPLRRTLGIAHLGGATLDNEENYLIKKLFCSLGM
VQVENQARIUHSSTVPGLGISFGRGGATTFQQDLQHADCILIQGSNMAECHPVGFRWVME
AKRRGATIIHIDPRFTRTSAVADIHIPIRAGSDIAFLGALVNYIISNDLWFKDYVVNYTN
AAALISKDYQDTEDLDGLFSGWDSEKGQYDPASWQYEGVEVSPAAGHREMFSGEPRAERG
AIIAAEKHDYTLTDPKCVFQIIKRHFSRYTAEVVEEACGIPRVLFEKVAQALCDNSGRER
TSAFCYAVGWTQHTVGVQYIRTAAIIQLLLGNIGRPGGGIMALRGHASIQGSTDIPTLYN
MLPGYLPMPKATYDTDLKKYIEFNESASGWWSEFPKYMVSLLKAWYGPAATAENQWCYDY
LPHITGDHSHMVTVAAMADGMVQGYFVMGENPAVGSMNTALQRKGLRNLKWLVVNDFAPT
ETAEFWREAPEIASGEIKTTDIATEVFFFPCAAHTEKEGTFTNTQRLLQWRHKAVEPPGD
CRSDLHFIWHLGRRLKELYRDSPDSKDRAIRDLTWDYGSKGAIEEPEAERVLAEINGYDS
SEQKYISGYKELKSDGTTICGCWIYCGCYKDGVNQPARRKPASEQNWVAQEWGWAWPDNR
RLLYNRASADLEGKPWSERKKYVWWDEEQKKWTGYDTPDFIVNRPPDYRPGPDAKGIDTL
SGIDPFIMQAEGKGWLYDPSGLLDGPLPTHYEPEESVLKNPLYSQQCNPARMEWVRRDNP
YHKAWGDSRYPFIATTYRLTEHHTAGGMSRWLPWLCELQPEMFIEVSPELAELRGLKNGG
WATISTMRGEIEARVLVTERMQPYVQNGTTLHTVGIPYHWSYVGRSRGDAANELTAFIAD
PNVSIEESKAFSVQVIAGRKRSDRRAAAGGPLNEPDSDGPKRDQPPVQDKPEGRHGLKAG
KTELTEEA
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaatggtcgctgcttaaatggccggctctccggcagatagccgaactggat
cctttgggcctgggagagtcggccatgtcggaaagaacccgcgcgctcaagccgcgcacg
gctgacgccgacagggtagtcgattcggtctgcccgtactgcggcgtcggctgcggccag
aaggtctacgtcaaagacggcaagatcatggacatcgagggtgactacgattcccccatc
tcgttaggcgctctctgccccaaggggtcggccagctctcaactggtagccggcacccac
agagtcaagaaagtcctgtatcgccgcccgtatggcacccaatgggaggagctgccgctg
caaaaggcgatggagatggtcgccgaccgtgtgaaaaagacgcgggacgaaacgtgggag
gagcagaataaggacgggcacccgttaaggcgcacgctgggtatcgcgcaccttggcggc
gccaccctcgacaacgaggagaactacctgatcaagaagctgttctgctcgctggggatg
gtccaggtcgagaaccaggcccgaatatgacattcctccacggtccccggtctggggatc
tctttcggcaggggaggcgccaccaccttccagcaggatctgcaacatgcagactgcatc
ctgatccaaggttccaacatggctgaatgccaccccgtcggcttccgctgggtcatggaa
gccaaacgcagaggggccaccatcatccacatcgacccgcgcttcacccgcaccagcgcc
gtcgccgacatccacatcccgatccgcgccgggagcgacatcgccttcctgggcgcactc
gtcaactacatcatcagcaacgatctctggttcaaggattacgtcgtcaattacaccaac
gcggccgcgctcatctccaaggactaccaggacaccgaggacctggacggcctgtttagc
ggctgggactcggaaaaagggcagtacgacccggcctcatggcagtacgagggggtcgag
gtgtcgccggcagccgggcacagggagatgttcagcggggagccgcgtgcggagcgcggc
gccatcatagccgcggaaaagcacgactacaccctgaccgaccccaaatgcgtcttccag
atcataaaaaggcacttctcgcgttataccgccgaggtggtcgaggaggcgtgcggcatt
cccagggtgcttttcgagaaagtcgcccaagccctttgcgacaactccgggcgggaaagg
accagcgccttttgctacgccgtcggctggacccagcatacggtcggtgtccagtacatc
cgcaccgcggccatcatccaactcctcttgggaaacatcggccgtcccggcggcggcatc
atggcgctcaggggacacgcctccattcaaggctccacggacatccccaccctttacaac
atgcttcccggctacctccccatgccgaaagcgacctacgacaccgaccttaagaaatac
atcgaattcaacgaatcggcctcggggtggtggagcgaattcccaaagtacatggtctcc
ttgctcaaggcctggtacggacccgcggccacggctgaaaaccagtggtgctacgactat
ctgccgcacataaccggcgaccattcccacatggtcaccgtcgccgccatggccgacggc
atggtgcaggggtatttcgtgatgggagagaacccggcggtcggttccatgaacacggcg
ctgcagcgcaagggtctgcggaatttgaaatggctggtggtgaacgatttcgccccgacc
gagacggccgagttctggcgtgaggcaccggaaattgcctctggagagatcaagacaacc
gacatcgccaccgaggtcttcttcttcccctgcgcggcccataccgagaaggaagggacc
ttcaccaacacgcaacggctgctgcagtggcggcacaaggcggtggagccgccgggggat
tgccgctccgatctgcacttcatctggcacctggggcggcggctcaaggagctctaccgc
gactctcccgactccaaggaccgcgccattcgcgacctcacctgggattacgggagcaag
ggggcgatagaagagccggaggccgaaagggtgctggcggagatcaacggctacgattcc
agcgaacagaaatacatctccggctacaaggagctgaaaagcgacggcaccactatctgc
ggctgctggatctactgcggctgttacaaagacggcgtgaatcagccggcccggcgcaag
ccggcgagcgaacagaactgggtcgcgcaggagtggggatgggcctggcccgacaaccgg
cgcctcctctacaacagggcttccgccgacctggaagggaaaccgtggtcggagcgcaag
aagtacgtctggtgggacgaggagcaaaagaagtggaccggctacgacacccctgacttc
atcgtcaaccgcccgcccgactaccgcccaggtcccgacgccaaggggatagacaccctc
tccgggatagatcccttcatcatgcaggcggaagggaagggatggctctacgacccgagc
ggccttctggacggcccgctcccgacccattacgagcccgaagaatccgtgctcaaaaac
ccgctttacagccagcaatgcaaccccgcgcgcatggaatgggtgcggcgcgacaacccc
tatcacaaggcatggggagactcgcgctatcccttcatcgccacgacctaccggctcacc
gagcaccacaccgcaggagggatgagccgctggctcccctggctttgcgagctgcagccc
gagatgttcatcgaagtctctccggaactggccgaactgagggggctcaaaaacggtggc
tgggccacgatcagcaccatgcggggggaaatcgaggcacgggtgctggtgaccgaacgg
atgcaaccctacgtgcagaacggcaccacgctgcatacggtgggaatcccctatcactgg
agctacgtcgggcgctccaggggagacgccgccaacgaactcaccgccttcatcgccgac
cccaacgtcagcatagaggagtcgaaggctttctcggtacaggtcatcgccggccgcaaa
cgaagcgatagacgtgccgcggccggtggcccccttaacgagccggactcggacggcccc
aaacgcgaccaacccccggttcaggataaacccgaaggaaggcacggccttaaggcagga
aaaaccgaattgacggaggaggcctga
DBGET
integrated database retrieval system
