Citrifermentans bemidjiense: Gbem_2345
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Entry
Gbem_2345 CDS
T00749
Symbol
pilY1-2
Name
(GenBank) type IV pilus assembly protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gbm02044
]
Gbem_2345 (pilY1-2)
02035 Bacterial motility proteins [BR:
gbm02035
]
Gbem_2345 (pilY1-2)
Secretion system [BR:
gbm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Gbem_2345 (pilY1-2)
Bacterial motility proteins [BR:
gbm02035
]
Pilus system
Pilus assembly proteins
Gbem_2345 (pilY1-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_5
T4P_PilY1
Big_12
CopC
PQQ_3
Motif
Other DBs
NCBI-ProteinID:
ACH39357
UniProt:
B5EF48
LinkDB
All DBs
Position
complement(2720210..2724982)
Genome browser
AA seq
1590 aa
AA seq
DB search
MKTLFATLVTCLIFGCLAASAFAAPQILGSSLSPASGATNVDPAVVDTIWAEFDDARMDK
DSFSGRISVDNGAKYSVSLVNDSKGDWVKISLKNNLQYSTTYTVSIDYRVQNKSGTKMGS
NYSWSFTTKAKPSTDTTAPVVTATFPASSATDVPIASDISITFSEVMDPLSITTFSISVN
NGTVSGTVSLDDTQKIATFHPTSSLNPDTPYTVTVSSTVGDAAGNRLPGDYTFTFRTLKV
DSIAPRVVSVTPVSGATGVATGASISATFSEAVSAGTISSSSFSVSGVSGTVSYNPSTWV
ATFTPSAPLAAGSTYTVTISTAVQDLSGNSLAGAKVWTFTTAGATPPPSLNDYCQVPPYV
SNDGTGVKPNLLLIVDNSGSMYEFAYKAPGTGTSSYDTSYDPAFPYFGYFDSARMYKYSG
SYFEPDTAAAVNKSSFWSGNFLNWLTMRRVDIIRKVLVGGKALSRSTNTTNYLIAAEDPD
RDFYKSYNNVRYTVRAGTSTEVIRDTTNNRSYDVKVYVGQNPPQDGLITGYRDKINFGLM
FFNDGYRYESGVTAVKDGGHVAVDLGTTGTNLVTQIENTDPSTWTPLAETLFEASRYFEA
ADSAYNGGTYSGRDPIQYPCQKNFVMILTDGESTQDENLPGASTNLAGKVTDPSLDVKSW
MDSIASQERYPSQYAASANTQSGSYYLEAVAYWAHNTDLRSSTLGKNALPGKQNITVYTV
FAFDDSAIGREILQKTAKYGGYDDYDSTGRPDKTRKWDKNGDGIPDTYFEAQTGSVLAES
LQNAFNDILARVSSGTAASILSNSEGSGANVLQALFYPKRFFGAQTSVDWIGELHNMWYY
VDPFISNSTMREDSDYVEATPSPAHYLNLGRDNVVGFRYNASLDRTTARRFSDAQGDGRP
DVDSNGDGVADSYTFLDEVDADSVKSIWRAGKLLWERSAPRTIYTQTVGTLTSFTGLDTS
LASTRSLLQAANQTEADKIISYIAGTDQGGYRNRTVNIGGTPGVWRLGDIVASTPKLQST
MKLNAYNTPVPGGYGDTSYGDDRHKTGFIYSSAYANRGMVYVGANDGMLHAFKLGKLDVS
SSGDRRASLSGTGLGEEQWAFIPKNALPYLTYYADPAYKHLYYVDGSTIINDVSMGKPAG
CSSDYWNCAKATDGSNWRTVLVGSMGLGGASKMKGAGCKGTDCVETPALDPLDVTKGVGY
SSYFALDVTQPESPSLMWEFGHQNLGFSTAGAALVKISARKADNVTPDKSKNGKWFAVLA
SGPTGPIDTSSHQFKGTSTQNLTIYVLNLEDGTVAAVLDTLVDGSKIANAFAGTITSGVS
DTDRWNTASPGHYQDDAIYIGYTQLLGTTWTGGGVLRVVTGEDPNPRNWKLSKVIDGTGP
VTTSVIRLQDRKNHNLWLYFGSGRYYYNQDDNDGQRRLYGVKDPCYTSADRLDASCSSGT
SLSQLTNQSSTISNSISNQGWYINLAGEQTAASLGAERVVTDPVALTNGVVYYTTYAPTS
DPCGFGGTTALWAAKFDTGGNPPAAALQGKVLVQLSTGSFEELDLEKRPPHTDPREVFDS
LVGKASADSPPIFTKSNLKPVKRIMHIKEH
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgttcgccaccttagtcacctgcctcattttcggatgcctggcggcgtcg
gcgtttgccgcaccccagatcctcggcagttccctttccccggcaagcggtgccaccaat
gttgacccagctgtggtcgacaccatatgggctgagttcgatgatgcccgaatggacaag
gacagcttctccggcaggatcagcgtcgacaacggcgccaagtattcggtgagcctggtt
aacgactcaaagggggactgggtcaagatcagcctgaagaacaacctccagtacagtacc
acctacacggtcagcatcgattacagggtgcagaacaaaagcggcactaagatgggttcc
aattacagctggagtttcaccaccaaggcgaaaccttccacggacaccactgctcctgtg
gttacggcaaccttcccagccagttccgccaccgacgttcctattgcctccgacatcagc
atcaccttcagcgaggtgatggaccctctcagcatcaccaccttcagcatcagcgtcaat
aacggcactgtcagcggcacggtttccctcgacgacacccaaaagatcgccaccttccat
cccacctccagcctcaatcccgacacaccctacaccgtcaccgtcagcagcacagtcggt
gatgcagcggggaacaggttgcctggagattacacctttaccttccgcaccctcaaggta
gacagcatcgctccgagggtggtttccgtcacccctgtctccggcgccaccggtgtcgca
accggcgcgtccataagcgccaccttcagcgaggccgtcagcgccggcaccatatcgtcc
agcagcttcagcgtaagcggtgtgagcggcacggtgagctataacccctccacctgggtc
gccaccttcacaccttccgcgccgcttgcagcaggttccacctatacggtgaccatttcc
actgcggtgcaggacctctccggcaactccctcgccggcgcgaaggtctggacctttact
actgccggggcgaccccgccaccttctctcaacgactactgccaggttcccccctacgtg
agcaacgacggaacaggggtcaagccgaacctgctcctcatcgtcgacaactcggggagc
atgtacgaattcgcctacaaggcgcccggtaccggtaccagctcatacgacaccagttac
gatccggcctttccctacttcggctacttcgacagcgccaggatgtataagtacagcggc
tcctacttcgagcccgatactgccgccgccgtcaacaagagctccttttggtcgggcaac
ttcctgaactggctcaccatgcgccgcgtcgacatcattcgcaaggtgctcgtgggagga
aaggcgctgtcgcgttccaccaacacgaccaactacctcatcgcggcggaggacccggac
cgcgacttttacaagagctacaacaacgttcgctacaccgtccgtgccggtacttcgacc
gaggtgatcagggacaccaccaacaacagaagctatgacgtcaaggtctacgtcggccag
aatccgccgcaggacggcctgatcacgggctaccgggacaagataaatttcggcctcatg
ttctttaacgacggctaccgctacgaaagcggcgttaccgcggtgaaggacggcggtcac
gttgctgtcgatctggggacaaccggcaccaacctggtcacgcagatagagaataccgat
ccctccacctggaccccgctcgcggaaacgctcttcgaggccagccgctacttcgaagct
gccgacagcgcctacaacggcgggacctactcggggagggatccgatccagtacccctgc
cagaagaacttcgtgatgatcctgacggacggggagtcgacccaggacgagaaccttccg
ggcgcctccaccaacctggccggcaaggtgacagacccaagcctcgacgtgaagagttgg
atggacagcatcgccagccaggaaaggtatcccagccagtacgcggcgagcgccaacacc
cagtcggggagctactacctggaagcggtagcctactgggctcataacaccgatctgcgc
tcctccaccctggggaagaatgcccttcccggcaagcagaacatcacggtctacacggtc
ttcgccttcgacgattccgccatcggccgggaaatacttcagaagacggccaagtacgga
gggtacgacgactacgactccaccggcaggccggacaaaacccgcaagtgggacaaaaac
ggcgacggcataccggacacctacttcgaggcccagaccggctccgtcctcgccgaatcc
ttgcaaaacgccttcaacgacatcctggcccgggtctcctccggcacagccgcctccatc
ctcagcaacagcgaggggagcggcgccaacgtgctgcaggccctcttttacccgaaacgc
ttcttcggcgcccagacctctgtggattggatcggggagctgcataacatgtggtactac
gtcgatcccttcatcagcaacagcaccatgcgggaggacagcgactacgtcgaggcgacg
ccctcgccggcgcactacctgaacctcggccgggataacgtggtcgggtttcgctacaac
gcctcgctcgaccggaccacggcgcggcgcttcagcgatgcccagggggacggcaggccc
gacgtcgacagcaacggggacggtgtcgccgacagctacaccttcctcgatgaggtggat
gccgactcggtgaagagcatctggcgcgccggaaaacttctctgggagaggagcgcgccg
cgcaccatctacacccagactgtcggcaccctcaccagcttcaccggcctggacacctcg
ctcgcctccacccgcagcctgctccaggcggccaatcagactgaggcggacaaaatcatc
tcctatattgcggggaccgaccagggggggtaccgaaaccgcaccgtgaacataggcgga
accccaggggtctggcgcttgggggacatcgttgcctcgacgccaaagctgcagtccacg
atgaagctaaatgcctataacacccctgtccctggaggatacggcgacacctcctacggc
gatgaccggcacaaaacaggcttcatctacagttccgcctatgccaatcgtggcatggtg
tacgtcggggccaacgacggaatgttgcacgccttcaagcttgggaaactcgatgtcagc
agttccggggaccgtcgggcctctctctccggcaccggtttgggggaggagcagtgggcc
ttcatccccaaaaacgcgcttccctatctaacctactacgcggacccggcatacaaacac
ctttactacgtggacgggtcaaccatcatcaacgacgtgagcatgggtaagcctgccggc
tgcagcagcgactactggaactgtgccaaggccacggacggaagcaactggcgcaccgtc
ttggtggggagcatggggcttggcggggcatccaagatgaaaggtgcggggtgcaagggt
accgactgcgtcgagaccccggccctcgacccgctcgatgtcaccaaaggtgtcgggtac
tcctcctacttcgccctcgacgtcacgcagcccgagtcgccgtcgcttatgtgggagttc
gggcaccagaacctcggcttctccaccgcaggggcggcactcgtgaagatcagcgcccgc
aaggcggacaacgtcacccccgacaagtccaagaacgggaagtggttcgccgtgctcgcc
tcgggccctaccggtcccattgacacctccagccaccagttcaaggggacctcgacccaa
aacctcaccatctacgtgctgaaccttgaggacggcacggttgccgcggtgctcgacacc
ctggtcgatggcagcaagatagcaaacgccttcgccggcaccatcacgagcggcgtctcc
gacacggaccggtggaacaccgcctcgcctgggcactaccaggacgacgccatttacatc
ggctacacgcagctcttaggcaccacctggaccgggggcggggtgctgcgggttgttacc
ggcgaggacccgaatccccggaactggaagctcagcaaggtgatcgacgggaccgggcct
gttaccaccagcgtgatccggctccaggaccgcaagaaccacaacctctggctctacttc
ggctccgggcgctactactacaaccaggacgacaacgacggacagcgccggctctacggc
gtgaaggatccgtgctacacctcagcggaccgcctcgatgcctcctgcagttcaggaact
tcactgtcgcagctgaccaaccagtcaagcaccatatcgaacagcatcagcaaccagggg
tggtacataaatctcgccggtgagcagactgccgcctcgctcggcgccgagcgtgtcgtc
accgatcctgtggcgcttaccaacggggtggtctactacaccacctacgcacccacctcc
gacccctgcgggttcggggggaccacggcgctatgggcggcgaagttcgataccgggggg
aatcccccggccgcggcactgcagggcaaggtgctggttcagctctccaccgggagcttc
gaggagctagacctggaaaaacggccgccgcacacggacccgcgcgaggtgttcgattcc
ctggtcgggaaagcgtcggcggattcaccccccatcttcaccaaaagcaacctgaagccg
gtgaagcggatcatgcacatcaaggaacactag
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