Citrifermentans bemidjiense: Gbem_2893
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Entry
Gbem_2893 CDS
T00749
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gbm03009
]
Gbem_2893
Enzymes [BR:
gbm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Gbem_2893
Ribosome biogenesis [BR:
gbm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Gbem_2893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
TRAM
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Cons_hypoth95
Methyltransf_11
TPMT
PCMT
RrnaAD
Methyltransf_23
Methyltransf_4
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ACH39896
UniProt:
B5EIU1
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Position
3336826..3338544
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AA seq
572 aa
AA seq
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MKFEHSRPQSQKPYKKDDSARTEGAESSATPKYSKNTSTTARKPKAAQTERTESTRSSRG
ETPAAAFGSRPARPKGDRSAAPPAPGKGRDRKPAAKTAGNRPERTPAGKGGASSRDERQP
TLRSGQVLELNILATNDEGFGVANHEGTRVLVAGGLPGEVLVAKITYVGRREAFAHTIKC
LKRSPDRNPSPACTLGRVCDGCGLMQMRYPAQLAWKKSLVARHFRKYPSLFEVAIRETIG
SPKELGYRNTAKLVIAGKNNDPVIGIYRRNTHDVLQIEDCALHHPLINKVVKAAKAGIKK
GKVQIYNPKSEMGLLRYLVVRVAEKTNQVMVVLVTTDQGYNEMHHLAKFIQQAVPEVSVV
AQNINTSTGNVIFGTKDRSITKAQTLKAFVGDKIFNLSPHSFFQVNSGAARIIYEKVREL
ANLKGTERVIDVYCGIGGISLYLADQAREVVGIEFVEAAVADATINAALNHVENCHFEAG
DAVHLIDEIGEEGGADLIVLNPPRKGCDEKVLRSVAAINPPRIIYVSCSPETLARDLDIL
SGLGYRTVEVQPVDMFPQTVHVEDVALLEKKQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgagcactcccgtccccagtcacaaaagccatacaagaaagacgactcagcc
agaaccgaaggcgccgagtccagcgctacccccaagtactccaaaaacacctcaactaca
gcgcgcaaacccaaagccgcccagactgagcgcaccgaaagcacccgcagctccaggggc
gaaactcccgctgcagcgtttggctcacgtcccgcccgcccgaagggagatcgttcggcg
gcgcctcccgcaccgggcaaaggcagggaccgtaaaccggcggcaaagacagccgggaac
agaccggagaggacgcctgctggaaagggaggagcatcttcccgcgacgagcgccagcct
acgctgcgcagcggacaggtgctggagctgaacattctcgctaccaacgacgagggcttc
ggcgtggccaaccacgaggggacccgcgtgctggtggcagggggacttccgggcgaggtg
ctggtggcgaagatcacctacgtcggccgcagggaagccttcgcccataccataaagtgt
ctgaagcgttctccggaccgcaacccctctcccgcctgcaccctgggacgggtgtgcgac
ggctgcggactgatgcagatgcgctacccggcccagttggcatggaaaaagtcgctggtc
gcccgccacttccggaaatacccctctcttttcgaggtcgccatcagggaaaccatcggc
tcgcccaaggagcttggatatcgcaacacggcaaaacttgtcattgccgggaagaacaac
gatcccgtcatcggcatctaccgtcgcaacacccatgacgtcttgcagatcgaggactgc
gcgctgcaccacccgctgatcaataaggtggtgaaggctgccaaggccgggatcaagaaa
ggaaaggtgcagatctacaaccccaagagcgagatggggcttttgcgctacctggtggtt
cgcgtggccgaaaagaccaatcaggtcatggtggttctggtgacgacggaccagggttac
aacgagatgcaccacctggcgaagttcattcagcaggcggtcccggaggtctcggtggtg
gcgcagaacatcaacacctcgaccggcaacgtgatcttcggcaccaaggaccgctccatt
accaaggcccagacgctgaaggcgttcgtgggtgacaagatcttcaacctttcgccccac
tccttcttccaggtcaacagcggtgccgcgcgcatcatctatgagaaggtgcgggagctg
gcgaacctgaaggggaccgagcgggtcatcgacgtctactgcggcatcggcggcatctcg
ctctatctcgccgaccaggctcgcgaagtggtcgggatcgaattcgtcgaggcagcggtc
gccgacgccaccatcaacgcggcactgaaccacgtggagaactgtcacttcgaggccggc
gacgccgtgcatctgattgacgagatcggggaggaagggggcgcggacctgatcgtgctc
aacccgccgcggaaagggtgcgacgagaaggtgttgaggagcgtggccgccatcaatccc
ccacgcatcatctacgtttcctgctcgcccgaaacgctggcgcgggatctggacatcctc
tccgggctcggctaccgcaccgtggaggtgcagccggtggacatgttcccgcagacggtg
catgtcgaggacgtggcgcttctggaaaaaaagcagtga
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