Citrifermentans bemidjiense: Gbem_2903
Help
Entry
Gbem_2903 CDS
T00749
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Gbem_2903 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gbm01007
]
Gbem_2903 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbm03016
]
Gbem_2903 (aspS)
03029 Mitochondrial biogenesis [BR:
gbm03029
]
Gbem_2903 (aspS)
Enzymes [BR:
gbm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Gbem_2903 (aspS)
Amino acid related enzymes [BR:
gbm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Gbem_2903 (aspS)
Transfer RNA biogenesis [BR:
gbm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Gbem_2903 (aspS)
Prokaryotic type
Other AARSs
Gbem_2903 (aspS)
Mitochondrial biogenesis [BR:
gbm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Gbem_2903 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ACH39906
UniProt:
B5EIV1
LinkDB
All DBs
Position
complement(3348750..3350531)
Genome browser
AA seq
593 aa
AA seq
DB search
MIDFLGDWKRSSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPE
RCPEAHAKAESARNEYVLAIRGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFT
LDGFVDVNENIRLKYRYLDLRTGTLQQNLMLRSKVAQLTRSYLSDNGFIELETPFLTKST
PEGARDFLVPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEF
TQIDCEMSFIDREDIITVMEGLMARIFTEARGVKVELPIERMTYQEAIRRFGVDNPDLRF
GLELVELSDIVKNSGFKVFADVVNGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGL
AYVKMTAEGWQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA
AKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA
YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIAF
GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLAAK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttctgggtgattggaagagaagcagttactgcggcgagttgagggggggc
cacatagggcaggaagtcaccctcatgggttgggtctccaagaggcgcgaccacggcggg
ctcatcttcgtcgacctgcgcgacagggacggcatctcccagatcgtcttcgacccggag
cgctgtcccgaggcccacgccaaggcggagtccgccaggaacgagtacgtccttgccatc
aggggtacggttgccgcccgcccggaagggaccgtcaacccgaagatgaagaccggcgag
atcgaggtgctggtgaccgagtgcaagcttttgaacccctccaaggcgctccctttcacg
ctggacggcttcgtggacgtcaacgagaacatcaggctcaagtaccgctatctcgacctt
cgcaccgggacgctgcagcagaacctgatgctccgctccaaggtggcccagttgacccgc
tcctacttgagcgacaacggcttcatcgaactggagacccctttcctcaccaagtccacc
ccggaaggggcgcgcgacttcctggttccctcccgcatcaacaagggcgagttctacgcg
ctgccgcagtccccgcagctcttcaagcagatcctcatggtctccggctttgaccgctac
ttccagatcgtgcgctgcttccgcgacgaggacctgcgcgccgaccgccagcccgagttc
acccagatcgactgcgagatgtccttcatcgaccgcgaggacatcatcaccgtgatggaa
gggctcatggcccgcatcttcaccgaggccagaggggtcaaggttgagctcccgatcgag
aggatgacctaccaggaggcgatccgccgcttcggcgtggacaacccggaccttcgtttt
gggctcgaactggtagagctctccgacatcgtcaagaactccggtttcaaggtcttcgcc
gacgtggtgaacggcggcgggatcgtcaagggtatgaacgtcaagggcgccggcgccatg
agccgcaaggaaatcgacgacctgaccgagttcgccaagatctacggcgccaagggtctc
gcctacgtgaagatgaccgccgaagggtggcaatcccccatcgccaagttcttcaccccc
gaagagatcgccaccatggataaggccttcgacgccaaagaaggggacctgctcctcttc
gtcgccgacaagccgaaggtggtcaacgattcgctgggcaaactcaggaatcatctcgcc
gccaagatggggctcaccgatcccaacgtcttccgcttcgtctggatcaccgacttcccg
cttctcgagtgggacgaggaagcgaaacgctgggcggcggtgcaccaccccttcaccgcg
cccatggacgaggacctgcagtacgtcgagagcgatcccggccgctgccgcgccaaggcc
tacgacctggtccttaacggcaacgagatcggcggcggctccatcaggatccatcaggag
gaagtgcagtccctcatgttcaagatgctggggctctccgaggagaacgcccgctccaag
ttcggcttcctgctcgacgcgctcgagtacggcaccccgccgcacggcggcatcgccttc
ggcctggaccgcctgatgatgctgatcaccggtagcgactcgatccgcgacgtcatcgct
ttcccgaagacccagaagggggcctgcctcatgtcggacgccccctccggtgtcgatgca
ctgcagctgcgcgagctcggcattcgtctcgccgccaagtag
DBGET
integrated database retrieval system
