Citrifermentans bemidjiense: Gbem_3102
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Entry
Gbem_3102 CDS
T00749
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00260
Glycine, serine and threonine metabolism
gbm00630
Glyoxylate and dicarboxylate metabolism
gbm00670
One carbon pool by folate
gbm00680
Methane metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
gbm01230
Biosynthesis of amino acids
gbm01240
Biosynthesis of cofactors
gbm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Gbem_3102 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Gbem_3102 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gbem_3102 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Gbem_3102 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Gbem_3102 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Gbem_3102 (glyA)
Enzymes [BR:
gbm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Gbem_3102 (glyA)
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Paralog
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACH40104
UniProt:
B5E8U0
LinkDB
All DBs
Position
complement(3590390..3591637)
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AA seq
415 aa
AA seq
DB search
MSVLETFDPAVAEVIRQETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRY
YGGCHCVDVVENLAIDRAKELFGADHVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHG
GHLTHGSPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDF
EAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE
DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQGQIVKNAKALAEGLTKRG
FKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGT
PAATSHGLKEAEMEQVAGFIAEVLGNVSDEAKLAAVKTQVNALMKRFPMYANRLV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactggaaacattcgatccggcagtcgcggaggtcatcaggcaagagaccgag
cgtcaggagtacaacctcgaactgatcgcctcggagaacttcgtctccccggcggtgctc
gaggcgcagggctcggtcctcaccaacaagtacgccgaagggtatcccggcaagcgttac
tacggcggttgccattgcgtcgacgtggtggagaacctcgccatcgaccgcgccaaggaa
ctcttcggcgccgatcacgtcaacgtgcagccgcactccggttcccaggccaacatggct
gtctacttctccgtgctgaagcccggcgacaccgtgctcgggatgaacctggcccacggc
ggccacctgacccacggcagcccggtcaacttctccggcaagctcttcaacatcgtcccc
tacggcgtgtccaaagagacccagaccatcgactacgaggagaccgagcgcctcgccctc
gagcacaagccgaagatgatcgtcgtcggcgcctccgcctacccgcgcatcatcgacttc
gaggccttccgccgcatcgccgacaaggtgggagccgtggtcatggtggacatggcgcac
atcgccggcctcgtcgcggcagggctgcacccgagcccggttccctacgccgagttcgtc
accaccaccacccacaagaccctgcgcggaccgcgcggcggcatgatcatgtgccgcgag
gactgggccaagaccctcaactccaacatcttcccgggcatccagggcggcccgctcatg
cacgtgatcgcagccaaggcagtcgccttcaaggaggcgctgaccccggagttcaagcag
taccaggggcagatcgtgaagaacgccaaggcgctagccgaagggctcaccaagcgcggc
ttcaagctcacctccggcgggaccgacaaccacctgatgctggtggacctctcccagacc
gagctgaccggcaaggtagccgaagaggcgctcgaccgcgccgggatcaccgtcaacaag
aacggcatccccttcgacacccgctcgccgttcatcacctccggcatccgcatcggcacc
ccggctgcgaccagccacgggctgaaagaggccgagatggagcaggtggcagggttcatc
gccgaggtcctgggcaacgtcagcgacgaggccaagctcgccgcagtaaagacccaggtc
aacgcgctgatgaagcgtttccccatgtacgccaaccgcctcgtctag
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