Citrifermentans bemidjiense: Gbem_3205
Help
Entry
Gbem_3205 CDS
T00749
Symbol
holB
Name
(GenBank) DNA polymerase III, delta-prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm03030
DNA replication
gbm03430
Mismatch repair
gbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbem_3205 (holB)
03430 Mismatch repair
Gbem_3205 (holB)
03440 Homologous recombination
Gbem_3205 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_3205 (holB)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_3205 (holB)
Enzymes [BR:
gbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gbem_3205 (holB)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gbem_3205 (holB)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gbem_3205 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DNA_pol3_delp_C
Motif
Other DBs
NCBI-ProteinID:
ACH40204
UniProt:
B5E9N0
LinkDB
All DBs
Position
3695169..3696131
Genome browser
AA seq
320 aa
AA seq
DB search
MPFSEVLGQDLAVSVLRRSIAMNRVSHAYLFSGIEGCGKKKTALAFVQAVFCGRDEACGV
CSSCRKIASGQHPDLHILEPDGAFIKIDQVRELQKELSYRPFEAPKKACIIDGADKFNLA
SGNALLKTLEEPPGNALMILIATERSTVLQTILSRCQALTFQPLPAALIEERLVREQFPA
EAARVAATLCGGSLRRGIEIATDGVLEGRVRFLERVLALELKDIAKLFAAAEEFAADKEG
LPGLLELLLSFLRDVLIYRSAPEALANADLAQLVEREASRCREGRVMELIEQLAAMRRML
ARNVNARLALEVFFMKLATR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccgaggtactcggccaggacttggccgtatccgtgctcaggcgctccatc
gccatgaaccgcgtttcccacgcctacctcttctccggaatcgaggggtgcgggaagaaa
aagaccgccctggccttcgtgcaggcggtcttctgcggccgcgacgaagcctgcggcgtc
tgctcctcctgccgcaagatcgcctcggggcagcacccggacctgcacatcctggagccc
gacggcgcgttcatcaagatcgaccaggtgcgtgagctgcaaaaagagctatcctaccgc
cccttcgaggctcccaagaaggcgtgcatcatcgacggggccgacaagttcaacctcgcc
tcaggcaacgcgctcctgaagacgctggaggaaccgccggggaacgccctgatgatcctg
atcgccacggagcgctcgactgtgctgcagaccatcctgtcgcgctgccaggcgctcacc
tttcagccgcttccggccgcgctcatcgaggagcggctggtgagggagcagttcccggcg
gaggcggcgcgggtggccgccaccctttgcggggggagtctcagaaggggaatcgagatc
gccaccgacggcgtgctcgaaggtagggtgaggttcctggagcgggtgctcgccctggag
cttaaagatattgccaagcttttcgccgcggccgaggagttcgcggccgacaaagaaggg
ctccctgggcttttggagctgctgctctcgtttttgagggacgtgctgatctaccgctca
gccccggaggccttggccaacgcggacctggcgcaactggtggagcgggaggcgtcccgc
tgccgcgagggacgggtgatggagctgatcgagcagttggcggcaatgcgccggatgctc
gcccgcaacgtgaacgcgcggctcgccctggaagttttcttcatgaagcttgcgacgcgc
tag
DBGET
integrated database retrieval system
