KEGG   Citrifermentans bemidjiense: Gbem_3286
Entry
Gbem_3286         CDS       T00749                                 
Name
(GenBank) sigma-54-dependent transcriptional response regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Gbem_3286
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gbm02022]
    Gbem_3286
Two-component system [BR:gbm02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Gbem_3286
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_3 bpMoxR AAA_16 ATPase ENTR1 AAA_2 MCM AAA_7
Other DBs
NCBI-ProteinID: ACH40283
UniProt: B5EAE4
LinkDB
Position
complement(3779157..3780533)
AA seq 458 aa
MTETILIVDDEEGIRSSLAGILEDEGYRTVCAADGVEALALCARELPGLVLLDIWMPKMD
GIETLQRLKESHPFLNVIMMSGHGTIETAVKSTKLGAYDFIEKPLSLEKVVVTVENALAM
NRLKEENAALRDQVQQGHEMIGNSAAMLQLGEQIRLVAPTNASVLITGENGTGKELVARS
VHFHSQRRDKPFIEINCAAIPEELIESELFGHERGAFTGAVAQKKGKFDLADGGTLFLDE
IGDMSLKTQAKVLRILQEKKFERVGGTRTLEVDVRIVAATNKLLEEEIRNGGFREDLYYR
LNVVPFKVLPLRERRDDIPLLARYFMDAFCSREGRESKRIVPEAMEALKRYEWPGNVREL
KNIVERLVIMTPSGTVTVDHLPDYFRGDGAGKDAGGGKLDSVLELSSLREAREEFEREFI
IQKLEENDWNVSKTAEAIELERSNLHRKIKSYGIDMKK
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaccgagaccattctgattgttgacgacgaggagggaatccgatcctccctggctggc
atcctcgaagacgaggggtaccggaccgtctgcgccgccgacggcgtcgaggcgctcgcc
ctttgcgcccgggagctaccggggctcgtgctcttggacatctggatgcccaagatggac
ggcatcgagacgctgcagcgcctgaaggaatcgcaccccttcctgaacgtcatcatgatg
agcggccacggcaccatcgagacggcggtgaaatcgaccaagctcggcgcctatgacttc
atcgagaagccgctttcgctggagaaggtggtggtcacggtggaaaacgccctggccatg
aaccgcctgaaggaggagaacgccgccctgcgcgaccaggtgcagcaagggcacgagatg
atcggtaattccgccgccatgctgcagttgggcgagcagatccggctcgtcgccccgacc
aacgcctcggtgctgatcaccggcgagaacggcaccggaaaggaactcgtagcccgctcg
gtccatttccacagccagcgccgcgacaagcccttcatcgagatcaactgcgccgccatc
cccgaggaactgatcgagagcgaactcttcggccatgagcggggtgctttcaccggagct
gtcgcgcagaagaaggggaaattcgacctggccgatggcggcacgctctttctggacgag
atcggcgacatgtccttgaagacgcaggccaaggtgctgcggatactgcaggagaagaag
ttcgagcgggtgggtggaacccggaccctggaggtggatgtccgcatcgtcgccgccacc
aacaagctcctcgaggaggagatcagaaacggcggcttccgcgaagacctctactaccgg
ctgaacgtggtccccttcaaggtcctgccgttgagggagcggcgcgacgatataccgctt
ctggcccggtacttcatggatgccttctgttctcgcgaggggagggagtcgaagcggatc
gtccccgaggccatggaggcgctcaagcgctacgagtggccggggaacgtgcgcgagctg
aagaacatcgtggagcggctggtaatcatgacccccagcgggacggtgaccgtcgaccac
ctccccgattacttccgcggcgatggtgccggcaaggatgcgggggggggcaagctcgac
agcgtcttggaactctccagcctgcgcgaggcgcgagaggagttcgagagggagttcatc
atccagaagctggaggagaacgactggaacgtctccaagaccgccgaggccatcgagctt
gaacggagcaacctgcaccgcaagatcaagagttacggcatagacatgaagaaatag

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