Citrifermentans bemidjiense: Gbem_3332
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Entry
Gbem_3332 CDS
T00749
Symbol
frdB
Name
(GenBank) succinate dehydrogenase/fumarate reductase, iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00020
Citrate cycle (TCA cycle)
gbm00190
Oxidative phosphorylation
gbm00650
Butanoate metabolism
gbm00720
Other carbon fixation pathways
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Module
gbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Gbem_3332 (frdB)
00650 Butanoate metabolism
Gbem_3332 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
Gbem_3332 (frdB)
00720 Other carbon fixation pathways
Gbem_3332 (frdB)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Gbem_3332 (frdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4_6
Fer4_4
Fer4_16
Fer4_21
Fer4_3
Fer4_15
Fer2
Fer4_13
Fer4_18
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
ACH40327
UniProt:
B5EAI8
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All DBs
Position
complement(3827298..3828038)
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AA seq
246 aa
AA seq
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MNLTLHVWRQSGPKEPGKLEQYEAKNVSPDQSFLEMLDEVNEHLIKEGKDPIVFDHDCRE
GICGMCSQVINGVPHGGQERTTVCQLHMRRFSDGDTIYIEPWRALAFPILKDLIVDRDAL
EKIMQAGGYTSCHTGGVADGNALLVPKPDADYAMDAAECIGCGACVAACPNGSAMLYTSA
KVAQLAALPQGKAEAAERVCAMTDAMQAAGFGNCSNHYECQAACPKGINVKFIARLNREY
QKALFK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcacactacacgtatggcgccaaagcggccccaaagagccgggcaagctcgag
cagtacgaggccaagaacgtaagtcccgaccagtccttcctggagatgctcgacgaggtg
aacgagcacctcatcaaggaaggaaaagatccgatcgtgttcgaccacgactgccgcgag
gggatctgcggcatgtgctcgcaggtcatcaacggcgtgccgcacggcgggcaggagcgc
accaccgtctgccagctgcacatgaggcgcttcagcgacggcgacaccatctacatcgag
ccgtggcgtgcccttgccttcccgatcctcaaggacctgatcgtggacagggacgccctc
gagaagatcatgcaggcaggcggctacacctcctgccacaccggcggcgtcgccgacggc
aacgcccttctcgttccgaagccggacgcggactacgccatggacgcggccgagtgcatc
ggttgcggcgcctgcgtcgctgcctgcccgaacggctcggccatgctctacacctccgcc
aaggtggcacagttggccgccctgccgcagggcaaagcggaagccgccgagcgcgtctgc
gccatgaccgacgcgatgcaggccgcaggtttcggcaactgctcgaaccactacgagtgc
caggcagcctgcccgaaagggatcaacgtcaagttcatcgccaggttgaaccgcgagtac
cagaaggcgctgtttaagtaa
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