Citrifermentans bemidjiense: Gbem_3333
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Entry
Gbem_3333 CDS
T00749
Symbol
frdA
Name
(GenBank) succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00020
Citrate cycle (TCA cycle)
gbm00190
Oxidative phosphorylation
gbm00650
Butanoate metabolism
gbm00720
Other carbon fixation pathways
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Module
gbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Gbem_3333 (frdA)
00650 Butanoate metabolism
Gbem_3333 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Gbem_3333 (frdA)
00720 Other carbon fixation pathways
Gbem_3333 (frdA)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Gbem_3333 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
AlaDh_PNT_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
ACH40328
UniProt:
B5EAI9
LinkDB
All DBs
Position
complement(3828038..3829951)
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AA seq
637 aa
AA seq
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MILDGKCPKGPIQTSWDRHRFDLKLVNPANKRKYKILVVGTGLAGGAAAASLGELGYNVE
AFCYQDSARRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVS
NNIIDQCVAQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALSRQVKA
GTVKLFARTEMLDLVVVDGEAKGITIRDLITGEIRTHVGDAVVLATGGYVNVFYLSTNAM
GCSVTANWRAHKKGAFFANPCYTQIHPTCIPQSGDHQSKLTLMSESLRNDGRCWAPKKKG
DNRHPNEIPEDERDYYLERKYPSFGNLAPRDIASRAAKEQCDDGRGVGPGGRGVNLDFSA
AIQRVGEDTIRERYGNLFEMYEKITDENAYKQPMRMYPAPHYSMGGLWVDYNCESNVPGL
FVLGEANFSVHGANRLGASALMQGLADGYFVIPYTIANYLAKTKPGAVKADHPECKKSIE
DVKSYNNRLLNINGKKTVSEFHRELGKIMWENVGMARSEETLKDAIKKIPVLREEFWKNV
KVTGKGEELNQQLENAGRVADFLEFGELMAKDALHRNESCGGHFRVEHQMPDGEAKRDDE
NYCYVGAWEFKGVDKEPELHKEPLAFDNVHLAVRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgatactcgacggaaaatgtccgaaaggaccgattcagacctcgtgggaccggcaccgc
ttcgacctgaagctggtcaaccccgcaaacaagcgtaagtacaagatcctcgttgtcggc
accggcctggccggcggcgcagccgcagcttccttgggcgagctcggctacaacgtcgaa
gccttctgctaccaggacagcgcacgtcgcgcccactccatcgcagcgcagggcggcatc
aacgccgcgaaaaactacccgaacgacggcgacagcatctaccgcctgttctacgacacc
atcaaaggcggcgacttccgcgcccgcgaggcggacgtgtggcgtctggcccaggtgtcc
aacaacatcatcgaccagtgcgtggcccagggtgtccccttcgcccgcgactacgccggc
tacctggataaccgctccttcggcggcgcgcaggtttcccgtaccttctacgcccgtggc
caaacgggccagcagctccttctgggcgcctactcggcactctcccgccaggtgaaggct
gggaccgtgaagctcttcgcccgcaccgagatgctggatcttgtcgtcgtcgacggcgag
gccaaagggatcaccatacgcgacctgatcaccggcgagatccgcacccacgtgggtgac
gcggtcgtcctcgccaccggcggctacgtgaacgtgttctacctctccaccaacgcgatg
gggtgctccgtcaccgccaactggcgcgctcacaaaaaaggcgccttcttcgccaacccc
tgctacacgcagatccacccgacctgcatcccgcagtccggcgaccaccagtccaagctg
accctcatgtccgagtcgctcaggaacgacggccgctgctgggctcccaagaagaagggg
gacaaccgtcaccccaacgagatcccggaagacgagcgcgactactacctggagaggaag
tatccctccttcggcaacctcgctccccgcgacatcgcctcgcgcgctgcgaaagagcag
tgcgacgacgggcgcggcgtcggccctggcggccgcggcgtgaatctggacttctccgct
gcgatccagcgcgtcggtgaggacaccatccgcgagcgctacggcaacctcttcgagatg
tacgagaagatcaccgacgagaacgcgtacaaacagccgatgcgcatgtacccggcaccg
cactactccatgggcggcctctgggtcgactacaactgcgagagcaacgtcccgggcctg
ttcgttttgggcgaggcgaacttctcggtccacggcgctaaccgcctgggcgcctcggca
ctgatgcagggcctggccgacggctacttcgtcatcccctacaccatcgccaactacctc
gccaagaccaagccgggcgccgtcaaggcggatcacccggagtgcaagaagtcgatcgag
gacgtgaagagctacaacaaccgcctgctcaacatcaacggcaagaagaccgtttccgag
ttccaccgcgaactgggcaagatcatgtgggaaaacgtcggcatggcgagaagcgaagag
accctcaaggacgccatcaagaagatcccggtcctgcgcgaggagttctggaagaacgtc
aaggtcaccggcaagggcgaggaactgaaccagcagctggagaacgccggccgcgtggcg
gacttcctcgagttcggcgagctgatggcaaaggacgctctgcacaggaacgagtcctgc
ggtggccacttccgcgtcgagcaccagatgccggacggcgaggcgaagcgcgacgacgag
aactactgctacgtcggggcctgggagttcaaaggtgtcgacaaggagcccgaactgcac
aaggagccgttggcgttcgataacgtacatctggcggtaaggagttataaataa
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