Citrifermentans bemidjiense: Gbem_3346
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Entry
Gbem_3346 CDS
T00749
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00521
Streptomycin biosynthesis
gbm00523
Polyketide sugar unit biosynthesis
gbm00525
Acarbose and validamycin biosynthesis
gbm00541
Biosynthesis of various nucleotide sugars
gbm01055
Biosynthesis of vancomycin group antibiotics
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01250
Biosynthesis of nucleotide sugars
Module
gbm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Gbem_3346 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Gbem_3346 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
Gbem_3346 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Gbem_3346 (rmlB)
00525 Acarbose and validamycin biosynthesis
Gbem_3346 (rmlB)
Enzymes [BR:
gbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Gbem_3346 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ACH40341
UniProt:
B5EAK2
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Position
complement(3842803..3843870)
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AA seq
355 aa
AA seq
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MQDAFTPTSLLVTGGAGFIGSNFINHFMAGNPGCRVINLDLLTYAGNLKNLAAVEENPDY
RFVKGDICDAGLVAGLLAEGEVDAVVHFAAESHVDRSITGPDIFVRTNVLGTQTLLEASR
LHAERVAGFRFLQVSTDEVYGSLGAQGYFTEETPLAPNSPYSASKAGADLLVRAYSETFG
LATLNTRCSNNYGPYHFPEKLIPLMIHNILKKKPLPVYGDGLNVRDWLHVKDHSVAIERV
LKLGKPGEIFNVGGNNEWKNIDIVNLVCDLMDERLGRRPGESRGLIAFVKDRKGHDRRYA
IDASKLKRELSWEPSYTFERGIAETIDWYLANQGWVEEVVSGAYREYYEKQYGQH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcattcaccccgacctcgcttctggtgacaggaggtgccgggttcatcggt
tccaatttcatcaaccacttcatggccggtaaccccggctgccgggtcatcaacctggac
cttttgacctacgccgggaacctgaagaacctggctgccgtggaggaaaaccccgactac
cgcttcgtgaaaggggacatctgcgacgccggcctcgtggccggactcctcgccgaggga
gaggtggacgccgtggtgcatttcgccgccgaatcccacgtggaccgttccatcaccggc
cccgacatcttcgtgaggaccaacgtcctcgggacccagacgctgctcgaagcaagccgg
ctgcacgcagagcgcgttgccggtttccggttcctgcaggtctcaacagacgaggtgtac
ggcagcctcggcgcccaagggtacttcaccgaagagacgccgctggcgcccaactccccc
tactcggccagcaaggcgggggcggacctcctggtgcgcgcctactccgagaccttcggc
ctcgccaccctgaacacccgctgctccaacaactacggcccgtaccacttcccggagaag
ctgattccgctcatgatccacaacatcctcaagaagaagccgctgccggtgtacggagac
ggactgaacgtgcgggactggctgcacgtgaaggatcactccgtcgccatcgagcgggtg
ctaaagcttggaaagccgggggagatcttcaacgtcggcggcaacaacgagtggaagaac
atagacatcgtgaacctggtctgcgacctgatggacgaaaggctcgggcggcgccccggc
gagagcaggggactgatcgccttcgtcaaggaccgcaagggtcacgaccgccgctacgcc
atagacgcctccaagctgaagcgggagctttcctgggaaccgagctacaccttcgagcgc
ggcatcgccgagaccatcgactggtacctggctaaccaggggtgggtcgaggaagttgtt
tccggcgcctaccgcgaatactacgagaagcagtacgggcagcactaa
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