Citrifermentans bemidjiense: Gbem_3457
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Entry
Gbem_3457 CDS
T00749
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00230
Purine metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
Module
gbm_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Gbem_3457 (purD)
Enzymes [BR:
gbm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
Gbem_3457 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
RimK
ATP-grasp_2
ATP-grasp
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Pox_Rif
Motif
Other DBs
NCBI-ProteinID:
ACH40450
UniProt:
B5EBF8
LinkDB
All DBs
Position
complement(3967845..3969116)
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AA seq
423 aa
AA seq
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MKVLVVGSGGREHALVWKIAQSPLVSQVFCAPGNPGTATLAQNVDIAVDNLQGLLDFAKK
EGVALTVVGPELPLSMGLVDLFEENGLKAFGARKNAAIIEASKAFSKDLMHKYNVPTAAY
GVFTEVEPAVSFIDQTGIPIVIKADGLAAGKGVIIAQTRDEAVAAVTDMLSGNAFGAAGS
RVVIEEFLKGEEASFLAFTDGERIIPLASAQDHKAVFDGDQGPNTGGMGAYSPAPVVTPA
IHDKAMAEVMRRTVDGMKAEGRTYRGVLYAGLMIDGGSVKTLEFNARFGDPECQPLLMRM
KSDIVPILMAVASGSLEGVEIEWHDKAAVCVVMAAEGYPADYRKGDVIGGLDAAGKIEDL
VVFHAGTKAAGEGVVTSGGRVLGVTALGGTVKEAIERAYKGVKEITWPGVHYRKDIGAKA
MNR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttggttgtaggtagcggagggcgcgagcacgcgctggtctggaagatcgcc
cagtccccgctggtaagccaggtgttctgcgcgccgggaaacccgggcacggccaccctg
gcgcaaaacgtggacatagcggtggacaacctccaggggctcctcgacttcgccaaaaag
gaaggggtcgcactcaccgtggtcggtccggaactcccgctttccatggggctcgtcgac
ctgttcgaggagaacggcctcaaggccttcggcgccaggaaaaacgccgccatcatcgag
gcgagcaaggcgttctcgaaggacctgatgcataagtacaacgtccccaccgcagcctac
ggggtcttcaccgaggtggagcccgctgtctccttcatcgaccagaccgggattcccatc
gtcatcaaggcggacggccttgccgcaggcaaaggggtcatcatcgcccagacgcgcgac
gaggcggtagccgccgtgaccgacatgctttccggcaacgctttcggcgcggctggttcc
agggtggtcatcgaggagttcctgaaaggggaagaggcctccttcttggccttcaccgac
ggcgaaaggatcatcccgctggcgagcgcccaggaccacaaggcggtcttcgacggcgac
caggggcccaacaccggcgggatgggagcatactccccggcgccggtggtcacccctgcc
atccatgacaaggccatggccgaggtgatgcgccgcaccgtggacgggatgaaggccgag
gggcgcacctaccgcggcgtactgtacgccgggctcatgatcgacggcggttcggtgaag
acgcttgagttcaacgcccgcttcggcgaccccgaatgccagccgctgctcatgcggatg
aagtccgacatcgtccccattctcatggccgtagcctccggaagcctggagggggtagag
atagagtggcacgacaaggcggcggtctgcgtcgtcatggcggcggaaggatacccggcc
gattaccgaaagggcgacgtcatcggcgggctcgacgcagccgggaagatcgaggacctg
gtggtgttccatgccggcacgaaggctgccggcgaaggtgtcgtcaccagcggcggccgc
gtcttgggagtgaccgcgctcggggggaccgtgaaggaagcgatagagcgcgcctacaag
ggagtgaaagagatcacctggcccggcgtgcattacaggaaagacatcggcgccaaggcg
atgaaccgctaa
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