Citrifermentans bemidjiense: Gbem_3460
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Entry
Gbem_3460 CDS
T00749
Symbol
selD
Name
(GenBank) selenide, water dikinase, selenocysteine-containing
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00450
Selenocompound metabolism
gbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Gbem_3460 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbm03016
]
Gbem_3460 (selD)
Enzymes [BR:
gbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
Gbem_3460 (selD)
Transfer RNA biogenesis [BR:
gbm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Gbem_3460 (selD)
Prokaryotic type
Gbem_3460 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
ACH40453
UniProt:
B5EBG1
LinkDB
All DBs
Position
complement(3972478..3973509)
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AA seq
343 aa
AA seq
DB search
MTDKVRLTTMVQAAGUAAKLGPAGLEEAIHDITRSDDPNLIVGVEGAEDAGIYRIGENLA
LVETTDIITPLVDDPFTFGRIAAANALSDVYAMGGRPVTAMNLAFFPACSLPTSVLAAIL
AGGSAALKEAGTCLVGGHTVEDDELKFGLAVTGLIDPARVVRNCTARPGDLIVITKPLGT
GIISTAIKAEMIEPEVEAEATRWMTTLNAKAADLMVACRATAATDVTGFGFIGHACEMAL
GAKVSFKIELARVPVIPGVPALIDDGMVPAGCYRNRQHYEQHVSGNSGDPLLPLFDPQTS
GGLLITFAPDDARTFLSRAGKEGLFAACIGEVEPAGGTPIVFV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaagtacggctcaccacgatggtgcaggcggcgggttgagctgccaagctg
ggcccggcgggcctggaagaagccattcacgacataacgcgctcggacgaccccaacctc
atcgtgggggtggaaggggcggaggacgccggcatctaccggatcggggagaacctcgcc
ctggtggaaacgacggacatcatcaccccgctggtggacgatcccttcaccttcggccgc
atcgccgcggccaacgccctctcggacgtgtacgccatggggggaagaccggtgacggcg
atgaacctcgcctttttccccgcctgctcgctccccacctcggtgttggctgcgatcctg
gccgggggatcggccgcgctcaaggaggcggggacctgcctcgtcggcggacacacagtg
gaggacgacgagctcaagttcgggctcgctgtgaccggcctcatcgacccggcgcgcgtg
gtcagaaactgcaccgcccgcccgggggacctcatcgtcatcaccaagccgctgggaacc
ggcatcatctcgacggccatcaaggcggagatgatcgaaccggaagtggaggcggaggca
acccgctggatgaccaccttgaacgccaaggcagcggatctcatggtcgcttgccgcgcc
acggccgcgaccgacgttaccgggttcggcttcatcggacacgcctgcgagatggctctg
ggcgccaaggtcagcttcaagatcgaactggcacgggtgccggtcatcccgggtgtaccc
gcgctgatcgacgacggcatggtccccgccggctgctaccgcaaccgtcagcattacgag
caacatgtctccggaaacagcggggaccccctgctgccgctcttcgacccccagacctcg
ggtgggctgttgatcaccttcgcccccgacgacgcccgcactttcctctcccgcgccggg
aaggaagggcttttcgccgcctgcatcggcgaggtcgagcccgccggaggaaccccaatt
gtcttcgtctag
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