Citrifermentans bemidjiense: Gbem_3975
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Entry
Gbem_3975 CDS
T00749
Symbol
ssb
Name
(GenBank) single-strand-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm03030
DNA replication
gbm03430
Mismatch repair
gbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbem_3975 (ssb)
03430 Mismatch repair
Gbem_3975 (ssb)
03440 Homologous recombination
Gbem_3975 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_3975 (ssb)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_3975 (ssb)
03029 Mitochondrial biogenesis [BR:
gbm03029
]
Gbem_3975 (ssb)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Gbem_3975 (ssb)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Gbem_3975 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
Gbem_3975 (ssb)
Mitochondrial biogenesis [BR:
gbm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Gbem_3975 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF5017
Motif
Other DBs
NCBI-ProteinID:
ACH40967
UniProt:
B5EG54
LinkDB
All DBs
Position
4511903..4512343
Genome browser
AA seq
146 aa
AA seq
DB search
MASLNKVMLIGNLGKDPEVRYTAGGTAVASFSVATTEKFKGKDGNWEEKTEWHNITLWAR
LAEIAGEYLSKGKTVYIEGRLQTRKWTDKEGKDRYTTEIVGEKMQMLSAKGEGGGGGQRQ
SRPQQDYNQGGGYEEPVFNPDDEIPF
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctgaacaaggtgatgctcatcgggaacctggggaaagaccccgaggtgcgc
tacaccgccggcgggaccgccgtagcatccttctccgtcgccaccaccgagaagttcaag
ggcaaggacggcaactgggaagagaagaccgaatggcacaacatcaccctctgggcgcgt
cttgccgagatcgccggcgagtatctttccaaggggaagaccgtatatatcgaagggcgt
ctgcagacccgcaagtggaccgacaaggaaggcaaagacaggtacaccaccgagatcgta
ggcgagaagatgcagatgctttccgccaaaggcgaaggcggcggtggtgggcagcgtcag
tccaggccgcagcaggattacaaccagggcggcggttacgaagagccggtattcaacccg
gacgacgagatcccgttctag
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