Citrifermentans bemidjiense: Gbem_4000
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Entry
Gbem_4000 CDS
T00749
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_4000 (radA)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Gbem_4000 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
GvpD_P-loop
AAA_24
RecA
SLFN-g3_helicase
AAA_16
AAA
nSTAND3
Lon_C
AAA_14
AAA_22
DAP3
PAXNEB
Rad51
AAA_29
AAA_5
Zeta_toxin
DUF7125
ABC_tran
AAA_18
DUF4428
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACH40992
UniProt:
B5EG79
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Position
4538511..4539869
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AA seq
452 aa
AA seq
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MAKVKVKTGFVCSDCGADYPKWQGHCTACDAWSTIKEVRLGSERAARRDGFAGATSSVTL
LSQVECTEQSRFSSGSEEFDRVLGGGFVPGSVILIGGDPGAGKSTILLQTMCYAAASKEV
LYVSGEESLQQIAGRARRLQLPLDRVKMLAESSVEGVLEAAKSERPEVVVIDSIQVMQSA
ALEAAPGGVSQVRECAAALTCYAKTSGVVLIMVGHVTKDQSLAGPMTLSHMVDTQVMLSS
TEDSRYRLMRTTKNRFGPVNELGVFAMTEAGLREVKNPSAIFLSRSEKAAPGSLISVLWE
GTRPLLVEIQSLVVGAQYGSPRRLGIGLDQNRIAMILAVITKHGGLVLSDQDVFVNVVGG
IRVLETSADLAVALAIVSSFRNTVLPQDLLVFGEVGLSGEIRPVSNGEMRLKEGVKHGFT
RAIVPKGNAPRKGIPGLEVVAVTSLPEALEAI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtaaaagtaaagacggggttcgtttgctccgattgcggcgcggactatccg
aagtggcaagggcactgcacggcctgcgacgcctggagcaccatcaaagaggtcaggctc
ggatccgagagagccgcgcggcgcgatggtttcgccggagccacctcgtcggtcaccctc
ctttcccaggtcgaatgcaccgaacagtcccgcttttccagcggcagcgaagagttcgac
cgggtgctcggcgggggcttcgtccccggctccgtcatcctgatcgggggggacccgggc
gccgggaaaagcaccatcttgctgcagaccatgtgctacgcggccgcctcgaaggaggtg
ctctacgtctcgggcgaggaatcgctgcagcagatcgccgggcgcgccagaaggctgcaa
ctccccctggaccgggtgaagatgctggccgagagttcggtggaaggggtactggaggcg
gcgaaaagcgagcgccccgaagtggtggtaatcgactcgatccaggtgatgcagtcggca
gcgctggaagcggcgccgggaggggtttcccaggtgcgcgagtgcgcggcggcgctcacc
tgctacgccaagacctccggagtggtgctgatcatggtcgggcacgtcaccaaggaccag
tccctggccggccccatgaccctctcccacatggtcgacacccaggtgatgctctcctcc
accgaggactcgcgctaccgcttgatgcgcaccaccaagaaccgcttcggcccggtcaac
gaattgggcgtcttcgccatgaccgaggcggggctgcgcgaggtgaaaaatccttcggcg
atcttcctctcccgcagcgagaaggccgcgcccggcagcctgatcagcgtcctttgggaa
gggaccaggccgcttctggtcgagatccagtccctggtagtgggggcgcagtacggctcg
ccgcgcaggctgggaatagggctcgatcaaaaccgcatcgccatgatcctcgccgtcatc
accaagcacggggggctggtgctctcggaccaggacgtcttcgtgaacgtcgtgggggga
ataagggtattggaaaccagcgccgacctcgcggtggccctggccatcgtttccagcttc
cgcaacacggtgctcccccaggacctgctggtgttcggcgaggtggggctctcgggcgag
atccgcccggtctccaacggggaaatgcggctcaaggaaggggtgaaacatggcttcacc
cgcgccatcgtgcccaagggaaacgcgccgagaaaggggatccctgggttggaggtggtg
gcggtcacttcgctccccgaggcgcttgaggcaatttaa
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