Citrifermentans bremense: GEOBRER4_00020
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Entry
GEOBRER4_00020 CDS
T07006
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03030
DNA replication
gbn03430
Mismatch repair
gbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEOBRER4_00020 (dnaN)
03430 Mismatch repair
GEOBRER4_00020 (dnaN)
03440 Homologous recombination
GEOBRER4_00020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbn03032
]
GEOBRER4_00020 (dnaN)
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_00020 (dnaN)
Enzymes [BR:
gbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEOBRER4_00020 (dnaN)
DNA replication proteins [BR:
gbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEOBRER4_00020 (dnaN)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEOBRER4_00020 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
BCG45252
UniProt:
A0A6S6LTJ9
LinkDB
All DBs
Position
1907..2995
Genome browser
AA seq
362 aa
AA seq
DB search
MKALQRIQGIVEKRNTMPILSNALLEVQNDQLFITATDLEVGMKSSYPTAVIREGKITVS
AKKLYEIVKEMPDEEIHFTTKDNDWVEITCGKARFNIVGLSSEEFPYFPKVKEESFLIFK
NEILADMIEKTSYAICYDETKYNLNGVFIKAFDENGENVLKMVATDGHRLSVSQKTISGN
ITSELSKGVIFPKKGIFELKKMVEEEDGEIMLGFMDNSAVIKKGNTVVVMRLIDGEFPDY
TKVIPASNDRIVQINRDKFLHSLKRMAILSSEKFKGVKIDVNPELVIISSSNPELGEARE
EIEVQYEGNQISARFNAKYLIDVLSVMEQREVELKLKDELSPVIMKAAAEEEFLAVIMPM
RL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccctccagagaatccagggtatcgtagaaaaacgcaataccatgccgattctc
tccaacgcgctgctggaggttcaaaacgaccagctcttcatcacggctaccgatctggag
gtcggcatgaagagctcctaccctactgcagtcatcagggaaggcaaaatcaccgtctcg
gccaaaaagctttacgagatcgtcaaggagatgccggacgaggagatccatttcaccacc
aaggataacgactgggtcgagatcacctgtggcaaggcgcgcttcaacatcgtcgggctt
tcctcggaggagttcccctattttcccaaggtgaaggaagagagcttccttatcttcaag
aacgagatcctcgcggacatgatcgagaagacctcctacgccatctgctatgacgagacc
aagtacaacctcaacggcgtcttcatcaaggcgttcgatgaaaacggggagaacgtcctc
aagatggtcgcaaccgacggtcaccgcctctcagtctcgcaaaagacgatctccggcaac
atcacctccgagctctccaaaggggtgatcttcccgaagaagggtatcttcgagctgaaa
aagatggtggaggaggaagacggcgagatcatgctgggcttcatggacaactccgcggtg
atcaagaaaggaaacaccgtggtggtgatgcggctgatcgacggcgagttcccggactac
accaaggttatccccgccagcaacgacaggatcgtgcagataaaccgcgacaagttcctg
cactcgctgaaaaggatggccatcctctccagcgagaagttcaaaggggtcaagatagac
gtaaacccggagctggtgatcatctcgtccagtaacccggaactcggcgaggcgcgcgag
gagatagaggtgcagtacgaagggaaccagatctcggcccggttcaacgcgaagtacttg
atcgacgtcctctcggtgatggagcagcgcgaggtggagctgaagcttaaagacgagctc
tccccggtgatcatgaaggccgcggcagaggaggagttcctggcagtcatcatgccgatg
aggctgtaa
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