Citrifermentans bremense: GEOBRER4_00040
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Entry
GEOBRER4_00040 CDS
T07006
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbn03032
]
GEOBRER4_00040 (gyrB)
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_00040 (gyrB)
Enzymes [BR:
gbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GEOBRER4_00040 (gyrB)
DNA replication proteins [BR:
gbn03032
]
Prokaryotic type
DNA Topoisomerases
GEOBRER4_00040 (gyrB)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GEOBRER4_00040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCG45254
UniProt:
A0A6S6M0Z9
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All DBs
Position
4227..6617
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AA seq
796 aa
AA seq
DB search
MNSEEQGDYGADKIQILEGLEAVRKRPAMYIGSTAAQGLHHLVYELVDNAIDEALAGYCD
SVQVIIHLDGSVTVEDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNSSYKVSGGLHG
VGSSVVNALSTKLDLEIRRNGHIYTQTYRKGVPQAPLEITGETKKRGTKITFMPDGEIFE
TTEFSFDVLSKRLRELAFLNAGVRIKIHDERTEKDHDFFYEGGIRSFVEYLNKNKNLVNP
EPIYIKGEKSGVDIEIAMQYNDSYDEKVFSFANNINTHEGGTHLIGFKASLTRTMNTYAT
TNNLLKNVKVAISGDDLREGLTAVISVKISQPQFEGQTKTKLGNSEVKGYVETLMNEKLA
TYLEENPAMARKILEKSIDAARAREAARKARELTRRKGALEVGTLPGKLADCQEKDPALC
ELFLVEGDSAGGSAKQGRDRKYQAILPLKGKILNVEKARFDKMLASQEIRTLISALGTSI
GKEDFDMAKLRYHRIIVMTDADVDGSHILTLLLTFFFRQMMELIERGYLYIAQPPLYKIK
RGRKEQYLKNEAALQAYLLEEGTEEMTLKLGVGSDERVYRGKQIIPILTQLIDYNELLDK
VVKKGINDELLRVFLKIGVKPGLEEMADLIALLPKMKEAFPEVTTEEFGDSIIFAFGNLR
VKIDHQIFTVLESYEYGMLLESHKRMRSVMGAGAGIVLGAEDKVVLETENQEEILSFFME
SAKKGLYIQRYKGLGEMNPEQLWETTMHQENRVLLQVKIEDAVAAEEIFTVLMGDQVEPR
RDFIEQNALNVSNLDI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagaagaacagggcgattacggggcagataagatccagatactggaaggactg
gaagcggtacgaaaacgtccggccatgtacatcggttccacggccgctcagggtttgcat
cacctggtgtacgaactggtggataacgccatcgatgaagcgctggccggctactgcgac
tcggtccaggtgatcatccatctggacggctcggtgacggtcgaggacaacggccgcggc
ataccgaccgacatgcacccgaccgaagggaggtcggcggcggaggtcgtccttaccgtt
ttgcacgcagggggcaaattcgacaactcctcatacaaggtctcgggtggcttgcacggc
gtcggcagttccgtcgtaaacgcgctttccaccaagctcgacctggagatccgcagaaac
ggccacatctacacacagacctaccgcaagggtgtaccccaggcgcccttggagataacc
ggcgagaccaagaagcgcggcaccaagatcaccttcatgccggacggtgagatattcgag
accacggagttctccttcgacgttctctcgaagcggctcagggagctcgccttcctgaac
gcgggggtccgtatcaagatccacgatgagcggaccgagaaggatcacgacttcttctac
gagggggggatcaggagcttcgtcgagtacctcaacaagaacaagaacctggtcaaccca
gagccgatatacatcaagggggagaagtccggcgtcgatatcgagatcgccatgcagtac
aacgactcctacgacgagaaggtcttctccttcgccaacaacatcaacacccacgagggc
ggcacgcacctcatcggtttcaaggcgtccctgacccggaccatgaacacttacgccacc
acgaacaaccttttgaaaaacgtgaaggtggcgatctcgggcgacgacttgcgcgagggt
ctcaccgcggtcatctcggtgaagatctcgcagccgcagttcgaggggcagaccaagacc
aagctggggaactcggaggtgaaggggtacgtcgagaccctgatgaacgagaagctcgcc
acctaccttgaagaaaacccggccatggccaggaagatcctggagaaatcgatcgatgcg
gcccgggcccgcgaggcggccaggaaggcgcgcgaactcacccgccgcaaaggggcgctg
gaggtggggacgctgccggggaaactcgccgactgccaggagaaggaccccgcgctctgc
gaactgttcctggtcgagggcgactccgcaggcggctccgccaagcaggggcgcgacagg
aagtaccaggcgatcctccccctgaagggcaagatcctcaacgtcgagaaggcgcgcttc
gacaagatgctggcttcccaggagatcaggaccctgatctctgcgctcgggaccagcatc
ggcaaggaagacttcgacatggcgaagctccgttaccaccgcatcatcgtcatgaccgac
gcggacgtcgacggctcgcacatactcaccctccttttgaccttcttcttccgccagatg
atggagttgatcgagcgcggctacctctacatcgcgcagccgcctttgtacaagatcaag
cgcggcaggaaggagcagtacctgaagaacgaagcggccctgcaggcctacctcctggag
gaagggaccgaggagatgacgctcaagctcggagtggggagcgacgagcgggtataccgc
ggcaagcagatcatccccatcctgacccagctgatcgactacaacgaactgttggacaag
gtggtaaagaaggggatcaacgacgagttgttgcgcgtgttccttaagatcggggtaaaa
cccggccttgaagagatggctgacctgatcgccctcttgccgaagatgaaggaggccttc
cccgaggtgaccaccgaggagttcggcgacagcatcatcttcgcctttggcaacctgagg
gtgaagatagaccaccagatcttcacggtgctcgagtcctacgaatacggcatgctcctg
gagagccacaaaaggatgcgttcggtgatgggggcaggcgccggcatcgtcctgggcgcc
gaggacaaggtggtgctcgagaccgaaaaccaggaggagatcctctccttcttcatggag
agcgccaagaagggtctctacatccagcgctataaaggtctgggcgagatgaacccggag
caactctgggaaaccaccatgcaccaggagaacagggtgctcttgcaggtgaagatcgag
gacgcggtggccgcagaggagatcttcaccgttctcatgggggaccaggtcgagccgcgg
cgtgatttcatcgagcagaacgcgctgaacgtctcgaacctcgatatttaa
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integrated database retrieval system
