Citrifermentans bremense: GEOBRER4_00260
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Entry
GEOBRER4_00260 CDS
T07006
Symbol
hdrD
Name
(GenBank) Fe-S oxidoreductase
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00680
Methane metabolism
gbn01100
Metabolic pathways
gbn01120
Microbial metabolism in diverse environments
gbn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
GEOBRER4_00260 (hdrD)
Enzymes [BR:
gbn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
GEOBRER4_00260 (hdrD)
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
GEOBRER4_00260 (hdrD)
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Motif
Pfam:
Fer4_2
Fer4_8
Fer4
Fer4_17
FrhB_FdhB_C
Fer4_10
Fer4_9
Fer4_6
Fer4_3
Fer4_16
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
BCG45276
UniProt:
A0A6S6LZ86
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All DBs
Position
complement(34454..35398)
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AA seq
314 aa
AA seq
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MNAKANKNQGSCIEPSYYQAVTKAIRTQAVQILKEGTVAGLVGYLPGRRKGTARPALITT
PEEAEKLIFSPACVNNLSVYLTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDL
FIIAVDCAGVYGSGAERSETVTEANIARKCLECSVHHPEGADFVAGSATDLSGLTPLEAE
EMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVESSPRPAG
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGP
LTQYREDDDQSFIK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaaagccaacaaaaaccaggggagctgcatcgagccgtcctattaccaggcg
gtcaccaaggcgatccgcacacaggcagtgcagatccttaaggagggaaccgtggcaggc
ttggtcggataccttcccggccgccgcaaggggactgcccgccccgccctgatcaccacg
ccggaggaagcggaaaagctcatcttctcgccggcctgcgtcaacaacctctcggtttac
ctgaccaagtcgaagaaaggggtgctgaagcagggacggatcggcatcgtcgcgaagggt
tgcgacatgcgcgcgttagccgggctgatgggggaatcccagatcaagagggaggacctt
ttcatcatcgccgtcgactgcgccggggtctacggctccggggcagagcgcagcgaaacg
gtgaccgaggcgaacatcgcgaggaaatgcctggagtgctccgttcatcacccggagggg
gcggatttcgtggctggctccgccactgatctttccggcctgaccccgctggaggccgag
gagatggcgcgcatcgaggcgctgccgcaggctgagcgctgggctttttggaaagaacac
ttctcccgctgcatacggtgcatggcctgccggcaggtctgtcccttttgctactgcgag
cagtgcctgtgcgacaagaaccgcccccaggcggtggagagttccccaaggcccgccggc
aacaccgcctggcatatcgtgcgcgccatgcatctggcggggcgctgcggcggttgtgcc
gagtgcgagcgcgtctgccccatggacatcccgctgaaccttttgaaccgacgcatggcg
aaggaactgaaggagctctacgactacgaggcaggcctcgcgcccgccgagaaggggccg
ctcacccagtaccgggaggacgacgaccagtcgttcatcaaatag
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