Citrifermentans bremense: GEOBRER4_01270
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Entry
GEOBRER4_01270 CDS
T07006
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
gbn
Citrifermentans bremense
Pathway
gbn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GEOBRER4_01270 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_01270 (ku)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GEOBRER4_01270 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
BCG45377
UniProt:
A0A6S6LTW1
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All DBs
Position
complement(164513..165292)
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AA seq
259 aa
AA seq
DB search
MRAMWSGSISFGLVNIPVKLYSGSQSNTLDLDMLRKSDLCPIKYLRVCKNDNQEVPYEEI
VKGYEYSDGEYIVLTDQDFENASLEKTHLIDIVDFIDEREIDTRFFEKPYYLEPEKTGPK
AYALLREALKRSGKVGVAHYVLRNRGSIGILRPLDKVLVLNQIRYAEEVRDAADLKLPGD
ENLREQEVALALSLIDQLTVKFDPEKYKDQYVDDLKRIIEEKAQGRTPAPQAKQPPPPKV
ADMMALLKESIKQKRKEAA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgatgtggtcaggttcaatcagcttcgggctggtgaacataccggtgaagctt
tacagcggctcccagagcaacactctcgatctggacatgttgcgcaagagtgatctctgc
cccatcaagtacctgagggtctgcaagaacgacaaccaggaggtcccctacgaggagatc
gtgaaggggtatgagtacagcgacggcgagtacatcgtcttgaccgaccaggacttcgag
aacgcgagccttgaaaagacgcacctcatcgacatcgtcgacttcatcgacgagcgggag
atcgacaccaggttcttcgagaagccgtactacctggagcccgagaagaccggtcccaag
gcgtatgcccttttgagagaggcgctgaagcgctcagggaaggtgggagtggcgcattac
gtgctgaggaacagggggagcatcgggattctgaggcccctggacaaggtgctggtgctg
aaccagatcaggtacgccgaagaggtgcgggacgcggccgacctgaaactccccggggac
gagaacctgcgcgagcaggaggtggcgctggcgctttccctcatcgaccagctgacggtg
aaattcgacccggaaaaatacaaggaccagtacgtggacgacctgaaacgtatcatcgag
gaaaaggcccagggaaggacgcccgcgccccaggcgaaacagcctcctccgccgaaggtc
gccgacatgatggcgcttttgaaggagagcataaaacagaaaaggaaggaggcggcctag
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