Citrifermentans bremense: GEOBRER4_01360
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Entry
GEOBRER4_01360 CDS
T07006
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
gbn
Citrifermentans bremense
Pathway
gbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GEOBRER4_01360 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_01360 (uvrB)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEOBRER4_01360 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GEOBRER4_01360 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BCG45386
UniProt:
A0A6S6LZJ0
LinkDB
All DBs
Position
170838..172826
Genome browser
AA seq
662 aa
AA seq
DB search
MDKFELVTNFEPRGDQPRAIGELADGVLRGDQHQVLLGVTGSGKTFTMAQVIARCNCPTL
VLAPNKTLAAQLYGEFKELFPNNAVEYFVSYYDYYQPEAYIPSSDTFIEKDSSINDEIDK
FRHSATRSLLTRRDVIIVASVSCIYGIGSPESYQEMQIRFREGDEVGRDELLQRLVAIQY
QRNDVDFHRGSFRVRGDTVEVFPAHDDERALRIEFFGDTVDAISEIDPLRGVQLQKLSRC
AIYPASHYVASRQTLERAVEQIRVELEERIRYFKSQNMLLEAQRIEQRTFFDIEMMEEMG
FCQGIENYSRHFDGRAAGEPPYTLIDYFPKDFLLVIDESHITVSQVGGMYRGDRSRKETL
VNYGFRLPSALDNRPLTFQEFQKKLHQTIYVSATPADYELKQAEGVVVEQLIRPTGLIDP
AIEVRPAAGQVDDLLHEARETAARGERVLVTTLTKRMAEELTDYYRELGIRVRYLHSDID
TFQRMEILRDLRLGEFDLLVGINLLREGLDLPEVSLVAILDADKEGFLRSTRSLIQTCGR
AARNVSGRVLMYADKVTGSMQAAIDETLRRRALQTAYNEEHGITPESVRRLIGNVLQAPE
EKDWVTVPASAEEFVSVKELEKTLKRLRKEMLAAAKAQEFERAAELRDKIKRLEVKEILK
SN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcgaactggtaacgaacttcgagccccgcggcgaccagcccagggcgatt
ggagaactggccgacggggtgctgaggggcgaccagcaccaggtgcttctaggtgtcacc
gggtcgggcaagaccttcaccatggcccaggtcatcgcgcgctgcaactgcccaaccctg
gtgcttgcgcccaacaagacgctggccgcccagctctacggcgagttcaaggaactcttc
ccgaacaacgccgtcgaatatttcgtctcctactacgactactaccagcctgaagcctat
atcccctcctccgacaccttcatcgagaaggactcctcgatcaacgacgagatcgacaag
ttccgccactccgccaccaggagcctcttgacccgccgcgacgtaatcatcgtcgcctcg
gtttcctgcatctacggcataggctcgcctgaatcgtaccaggagatgcagatccgcttc
cgggaaggggacgaggtggggcgcgacgagcttttgcagcggctggtggcgatccagtac
caaagaaacgacgtcgatttccaccgtggctccttccgggtcaggggggacacggtcgag
gtctttcccgcacacgacgacgagcgcgcgctaaggatcgaattcttcggggacacggtc
gacgccatctccgagatagaccccctgcgcggggtgcagctgcagaagctttcccgctgc
gccatctaccccgcctcccactacgtcgccagccggcagaccctggagcgggccgtggag
cagatccgggtcgagctggaggagcggatccgctacttcaagtcgcagaacatgctcctg
gaggcgcagcgcatcgagcagcggaccttcttcgacatcgagatgatggaagagatggga
ttttgccaggggatcgagaactactcgcgccacttcgacggccgtgccgctggagagccc
ccctacacgctgatcgactactttcccaaggacttcctgctggtgatcgacgagtcccac
atcacggtttcccaggtgggggggatgtaccgcggcgaccgcagccgcaaggagaccctg
gtgaactacggcttcaggctcccctccgccctcgacaaccgcccgctcaccttccaggag
ttccagaagaagctgcaccagaccatctacgtttccgcaaccccggcggactacgagttg
aagcaggctgaaggggtggtggtcgagcagctgatccgccccaccggcctcatcgacccg
gccatcgaggtgcgccctgccgcagggcaggtggacgacctgctgcacgaggcgcgcgag
acggcggccaggggagaaagggtgctggtcaccaccctcaccaagcgcatggccgaggag
ctcaccgactactaccgcgagctcgggatccgcgtccgttacctgcactccgacatcgac
accttccagcgcatggagatcctcagggacttaagactcggtgagttcgacctcctggtc
gggatcaacctgctcagggaagggctcgacctccccgaggtctcgctggtggcgatcctc
gatgcggacaaggaaggtttcctgcgttccaccaggtcgctgatccagacctgcgggcgc
gcggcgaggaacgtgtcggggcgcgtgctcatgtacgcggacaaggtgaccggctccatg
caggcggcgatcgacgagaccctgagaaggcgagcgctccagaccgcctacaacgaggag
cacggcataacacctgagagcgtgcggcggctgatcgggaacgtgctgcaggcccccgag
gagaaggactgggtcacggtgccggcctcggccgaggagttcgtgagcgtcaaggagctg
gagaagacgctgaagaggctgagaaaggagatgctggcggcggcgaaggcccaggaattc
gagcgtgcggcggagctgagggacaagatcaagcggctggaggtcaaggaaatcctgaaa
agcaattga
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