Citrifermentans bremense: GEOBRER4_01450
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Entry
GEOBRER4_01450 CDS
T07006
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbn03019
]
GEOBRER4_01450 (cafA)
03009 Ribosome biogenesis [BR:
gbn03009
]
GEOBRER4_01450 (cafA)
Messenger RNA biogenesis [BR:
gbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GEOBRER4_01450 (cafA)
Ribosome biogenesis [BR:
gbn03009
]
Prokaryotic type
rRNA processing factors
GEOBRER4_01450 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF5351
Motif
Other DBs
NCBI-ProteinID:
BCG45395
UniProt:
A0A6S6M265
LinkDB
All DBs
Position
180709..182199
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AA seq
496 aa
AA seq
DB search
MGNELVINTTSHETRIALIENGTIAELYVERSRVKGIIGNIYKGRVVRVLPGMQAAFVDI
GLEKAAFLYVADVFDAMDEYDSYIEGEQGEEPMPHPLHPIEELLQEGQELLVQISKEPIG
TKGARITAHISLPGRHLVYMPTVDHVGISRRIEDEAERERLKEIVDRIKPVGGGFIVRTV
SDGKSEEDLVADLHYLTKLWDEIAKKKDNAGAPTLIHSDLDVTQKVVRDILTESVERIVV
DSKPEYDKIVQFISTFMPKMKYSIELYDEEEPIFDHFGLEVEISRALGRKVWLKSGGYII
IEQTEALTAIDVNTGRYVGKHNLEDTILKTNLEAVKEIAYQLRLRNLGGIIIIDFIDMEK
EVNREKVYGALEEALKSDKSKTNILKISELGLVEMTRKRVRESLGRMMCEPCPYCEGRGY
VKSKISVCHEIFRELRREMLDIRGTKVMLTVHPQVADLLYDEERRGLEELEKNFKKRITV
RAKPGFHQEQFEVAVS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgaactggtaataaacaccacctcccacgaaacccgcatcgcgctcatcgaa
aatggcaccattgcggagctgtacgtcgagaggagcagggtgaaggggatcatcggcaac
atctacaagggaagggtggtccgggtgctccccggcatgcaggcggcgttcgtggacatc
gggctggagaaggctgcatttctctacgtggcggacgtattcgacgccatggacgagtac
gacagctacattgaaggtgagcagggcgaggagccgatgccgcacccgctgcatccgatc
gaggaactgctgcaggagggacaggaactcctggtgcagatctccaaagagcccatcggg
accaagggagcgcgcatcacggcccatatctcgcttccggggcgccacctggtgtacatg
ccgacggtggatcacgtcggcatctccaggaggatcgaggacgaagcggagcgcgagcgt
ctgaaggagatcgtggaccgcatcaagccggtcggcggaggtttcatcgtcaggaccgtt
tccgacggcaagagcgaagaggacctggtggcggacctgcactacctgaccaagctctgg
gacgagatcgccaagaagaaagacaacgcgggggctcccaccctgatccactccgacttg
gacgtgacccagaaggtggtgcgcgacatcctgaccgagtcggtggagcgcatcgtggtc
gactcgaagcccgagtacgacaagattgtccagttcataagcaccttcatgccgaagatg
aagtactccatcgagctctacgacgaggaggagccgatcttcgaccacttcggcctggag
gtcgagatcagccgcgccctggggcgcaaggtctggctcaagagcgggggctacatcatc
atcgagcagaccgaggcgctgacggcgatagacgtcaacaccgggcgctacgtgggcaag
cacaacctggaagacaccatcctgaagaccaacctggaggctgtgaaagagatcgcctac
cagctgcgcttgaggaacctgggcgggatcatcatcatcgacttcatcgacatggagaag
gaggtgaaccgtgagaaggtgtacggcgccctggaagaggccctgaagagcgacaagtcc
aagaccaacatcctgaagatctcggagctggggctcgtggagatgacccgcaagagggtg
cgcgagagcctggggcgcatgatgtgcgagccctgcccctactgcgaggggcgcggttac
gtgaagtccaagatctccgtctgccacgagatcttccgcgaactgcggcgggagatgctg
gacatccgcggcaccaaggtgatgctcaccgtgcatccccaggtggccgacctcctttac
gacgaggagcggcgcgggctggaggagttggagaagaacttcaagaagcggatcacggtc
cgcgccaagcccggcttccaccaggagcagttcgaggtcgccgtaagctag
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