Citrifermentans bremense: GEOBRER4_02000
Help
Entry
GEOBRER4_02000 CDS
T07006
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03030
DNA replication
gbn03430
Mismatch repair
gbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEOBRER4_02000 (dnaX)
03430 Mismatch repair
GEOBRER4_02000 (dnaX)
03440 Homologous recombination
GEOBRER4_02000 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbn03032
]
GEOBRER4_02000 (dnaX)
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_02000 (dnaX)
Enzymes [BR:
gbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEOBRER4_02000 (dnaX)
DNA replication proteins [BR:
gbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEOBRER4_02000 (dnaX)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEOBRER4_02000 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_30
AAA_16
DUF3646
RCF1-5-like_lid
AAA_14
PIF1
ResIII
Mg_chelatase
Glyco_tranf_2_5
DUF815
AAA_19
AAA_18
nSTAND3
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCG45450
UniProt:
A0A6S6LXE3
LinkDB
All DBs
Position
complement(240640..242367)
Genome browser
AA seq
575 aa
AA seq
DB search
MSYLVLARKWRPQTFSDLVGQEHVSQTLKNAIDGGRVAHAFLFSGARGVGKTSSARILAK
ALNCESGLTVEPCNTCSTCLEITEGNSVDVFEIDGASNTGVDDIRELRDNIKYLPSRSRY
KIFIIDEVHMLTTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFKRIAL
PRIVSRLRYIVDQEGVQVSDEALAVVARKGDGSMRDSLSTLDQVLAFCGNQVADADVAAL
LGVVDRRLIMDGCRAVLSKEVRQALQIVAQVDSFGYSMRQFCRELIYLFRNIAIIKAVGE
PGELLELSEAELGELRELSGTASGNDLQRHLTLLLKAEAEMAHASFPRLVLEMALMKMAT
LAPAIAVQELLSRLDALESGDPAPRPPHRESAPSRPASPPHQAPPAARDPQPQRPAAAPV
ASAPPPTPAAPVAAGDGIDLWSSFVQFVKGKRPMLGTELEQVHPVKVSRELLEIGCLNGT
YELKRMQDPERVTELKELAKVHFGQAPAVKITVLSEVPKDAPPSLSEKKSLEDAERQATL
RREAEEHPLVAAAVALFDGEIAEVREISDKKVIQS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctatctcgtactcgctagaaaatggcgcccccagaccttcagcgatctggtcggc
caggagcatgtcagtcagaccctgaaaaacgccatcgacggggggagggtcgcgcacgcc
ttcctgtttagcggggcccgcggcgtgggcaagaccagttccgcgcgcatcctcgccaag
gcgctcaactgcgagagcggcctcaccgtggaaccgtgcaacacctgctccacctgcctg
gagatcaccgaggggaactcggtcgacgtcttcgagatcgacggcgcctccaacaccggc
gtggacgacatcagggagctgcgcgacaacatcaagtacctcccctcgcgctcccgctac
aagatcttcatcatcgacgaagtccacatgctcaccaccaacgccttcaacgcgctgttg
aagacgcttgaggagccccccccgcacgtaaagttcattttcgccaccactgaaccgcac
aaggtccccatcaccatcctatcgcgctgccagcgcttcgacttcaagaggatcgcgctg
ccgcgcatcgtctccaggctgcgctatatcgtcgaccaggaaggggtgcaggtctccgac
gaggcgctggcggtcgtcgccaggaaaggggacgggagcatgcgcgactcgctctccacc
ctggaccaggtgctcgccttctgcggcaaccaggtggcagacgccgacgtcgccgcgctt
ttgggcgtggtcgaccgccgtctgatcatggacggctgccgcgccgtgctctcaaaggag
gtgcgccaagcgctgcagatcgtggcgcaggtggattccttcggttacagcatgcgccag
ttctgccgcgagctgatctacctgttccgcaacatcgccatcatcaaggcggtcggggaa
ccaggtgagcttttggaactttccgaggccgagcttggcgagttgcgcgagctctccggc
accgcctcgggtaacgatctccagcgccacctgaccctgctcctgaaggctgaggcggag
atggcgcacgcgagcttcccgcgcctggtgctggaaatggccctgatgaagatggcgacc
ctggcgcctgcgatcgccgtacaggagctcctgtccaggctggacgcgctggagtcggga
gaccccgccccgcgcccgccccaccgggaaagcgccccctcccgcccagcatcccccccg
caccaggcgccccccgcagcgcgggatccacagccccagcgtcctgccgccgctcccgtt
gcttcggctcccccgcccacgcctgcagcgccggttgcagccggagacggcatcgacctc
tggagcagcttcgtgcagttcgtcaaggggaaaagaccgatgctggggaccgaactggaa
caggtccacccggtcaaggtttcccgggagctgctggagatcggttgcctgaacggaacc
tacgaactgaagcggatgcaggacccggagcgggtgaccgaactgaaggagcttgccaag
gtccacttcggccaggccccggcggtcaagattacggtgctgagcgaagtgccgaaggac
gcaccgccgagcctgtcggaaaaaaaaagccttgaagatgccgagcgccaggcaaccctg
agacgcgaggcggaggaacacccgctggtggcggcggcggtggcgctgttcgacggggag
atcgctgaagtgagggaaatttccgacaagaaagtcatacaatcataa
DBGET
integrated database retrieval system
