Citrifermentans bremense: GEOBRER4_02440
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Entry
GEOBRER4_02440 CDS
T07006
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GEOBRER4_02440 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbn03019
]
GEOBRER4_02440 (groL)
03110 Chaperones and folding catalysts [BR:
gbn03110
]
GEOBRER4_02440 (groL)
03029 Mitochondrial biogenesis [BR:
gbn03029
]
GEOBRER4_02440 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gbn04147
]
GEOBRER4_02440 (groL)
Enzymes [BR:
gbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GEOBRER4_02440 (groL)
Messenger RNA biogenesis [BR:
gbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GEOBRER4_02440 (groL)
Chaperones and folding catalysts [BR:
gbn03110
]
Heat shock proteins
HSP60 / Chaperonin
GEOBRER4_02440 (groL)
Mitochondrial biogenesis [BR:
gbn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GEOBRER4_02440 (groL)
Exosome [BR:
gbn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GEOBRER4_02440 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GEOBRER4_02440 (groL)
Exosomal proteins of breast cancer cells
GEOBRER4_02440 (groL)
Exosomal proteins of colorectal cancer cells
GEOBRER4_02440 (groL)
Exosomal proteins of bladder cancer cells
GEOBRER4_02440 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
BCG45494
UniProt:
A0A6S6M1J1
LinkDB
All DBs
Position
287331..288974
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKIIKFDQEARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEI
ELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGL
DQAVEALVAELKSISKPIKDHKEIAQVGTISANNDKTIGDIIAQAMEKVGKEGVITVEEA
KAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMDNVAILIHDKKIANMKDLLPVLEQT
AKSGRPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGKV
ISEEVGFKLENTTIDMLGQAKKITVDKDNTTIIDGYGAEADIQGRVKMIRAQIDETSSDY
DREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYL
RALKVLENLQLAPEQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDKVKNGKDAFGYNAA
DDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGAMPAMPGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatcatcaagttcgaccaggaagcacgcaactgcatcctcaaaggtgtc
aacaccctggcagatgccgttaaagtgaccctgggccccaaagggcgcaacgtcgtcatc
gagaagtcctacggcgcgccgctcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcgcagctggtgaaggaagtcgcttccaag
acctccgacgtggccggcgacggcaccaccaccgcaaccgtgctggcacaggcgatctac
cgccagggcgccaagttggtcgcggcagggcacaacccgatggagatcaagcgcggtctg
gaccaggccgtcgaagcactggtcgcagagctgaagagcatctccaagccgatcaaggac
cacaaggaaatcgcgcaggtcggcaccatctccgccaacaacgacaagaccatcggcgac
atcatcgcccaggcgatggagaaggtcggcaaggaaggggtaatcaccgtcgaggaagcc
aaggcgatggaaaccacccttgagaccgtcgagggtatgcagttcgaccgcggttacctc
tccccctacttcgtcaccgatccggagcgcatggaagccgcgatggacaacgtcgccatc
ctgatccacgacaagaagatcgccaacatgaaggacctcctcccggttctcgagcagacc
gccaagtccggccgtccgcttttgatcatcgccgaggacatcgagggcgaagcgctggca
accctggtggtcaacaagctgcgcggcgtgctgaacgtctgcgcagtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgaccggcggcaaggtg
atctccgaggaagtaggcttcaaactcgagaacaccactatcgacatgctgggccaggcc
aagaagatcaccgtcgacaaggacaacaccaccatcatcgacggctacggcgctgaggca
gacatccagggccgcgtcaagatgatccgcgcccagatcgatgagacctcctccgactac
gaccgcgagaagctccaggagcgcctcgcgaaattggtcggcggcgttgccgtcattaag
gtcggtgctgctaccgaaatcgagatgaaggagaagaaggcacgcgtcgaagacgcactg
cacgcaacccgcgcggcggtcgacgaggggatcgtccccggaggcggcgtggcttacctg
cgcgccctgaaggtgctggaaaacctccagctcgcaccggagcagcagttcggcgttaac
gtgatcaagcgcgccctcgaggagccgatccgacagatctcccagaacgcgggcgtcgac
ggctccatcgtggtagacaaggtcaaaaacggcaaggatgctttcggctacaacgcggct
gacgacgtctacgtcgacatgatcgaggccggcatcatcgacccgaccaaggtctccagg
agcgcgctgcaaaacgccgcttccgtggcaggtctcatgatgaccaccgaggctatgatc
gccgacaagccgaaagaagaaggcgcgatgccggcaatgccgggcggcatgggcggcatg
ggtggcatgggcggcatgatgtag
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