KEGG   Citrifermentans bremense: GEOBRER4_03410
Entry
GEOBRER4_03410    CDS       T07006                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
gbn  Citrifermentans bremense
Pathway
gbn00300  Lysine biosynthesis
gbn00470  D-Amino acid metabolism
gbn01100  Metabolic pathways
gbn01110  Biosynthesis of secondary metabolites
gbn01120  Microbial metabolism in diverse environments
gbn01230  Biosynthesis of amino acids
Module
gbn_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gbn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GEOBRER4_03410 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GEOBRER4_03410 (dapF)
Enzymes [BR:gbn01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GEOBRER4_03410 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase RGM_C AAA_7
Other DBs
NCBI-ProteinID: BCG45591
UniProt: A0A6S6M1I9
LinkDB
Position
complement(415931..416767)
AA seq 278 aa
MKFTKMQGAGNDYVYVNCFEEVVHDPAAVAIKVSNRNFGIGSDGLILIMPSEVADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVAKKEITAETGAGILTLQLFTGADGKVEKVRVN
MGPPRLTRKEIPMLGEPDERVVNVPLNVLHSTFNITCASMGNPHCVIFVDDVDAFQVEKY
GPLIENHELFPRRTNVEFVQIVSRTEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTE
KRILNHLTGGDLEMEWGEDGNIYMTGPAVEVFTGEIDV
NT seq 837 nt   +upstreamnt  +downstreamnt
atgaaattcacaaagatgcagggtgcaggcaacgactacgtgtatgtcaactgttttgaa
gaggtggtgcacgaccctgccgccgtggcgataaaagtctccaaccgcaacttcggcatc
gggtccgacgggctgatcctgatcatgccgagcgaggtggccgacgtaaggatgcggatg
ttcaattcggacggctccgaaagcgagatgtgcggcaacggtatccgctgcgtggcgaaa
tacgcctacgaccacgggatcgttgcgaaaaaggagatcacggcggaaaccggcgccgga
atcctgacactgcagcttttcaccggagccgacggcaaggtcgaaaaggtgcgggtgaac
atggggccgccgaggctgaccaggaaggagatccccatgctgggagagccggacgagcgg
gtggtcaacgtgccgctcaacgtactccactccaccttcaacatcacctgcgcctcgatg
gggaacccgcactgtgtcatcttcgtggacgacgttgacgcgttccaggtggagaagtac
ggccccctgatcgagaatcacgagctgttcccgcgccgcaccaacgtggaattcgtccag
atcgtatcccgcaccgaggtgcgacagcgcacctgggagcgcggcgccggcgaaacgctt
gcctgcggcaccggctccagcgccgtcaccgccgcctgcgtcctgaacgggctcaccgag
aagcgcatcctgaaccacttgaccggcggcgacctggagatggagtggggcgaggacggc
aacatctacatgaccggccctgcagtcgaggtcttcactggggaaatcgacgtataa

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