Citrifermentans bremense: GEOBRER4_04870
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Entry
GEOBRER4_04870 CDS
T07006
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00470
D-Amino acid metabolism
gbn00550
Peptidoglycan biosynthesis
gbn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEOBRER4_04870 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GEOBRER4_04870 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbn01011
]
GEOBRER4_04870 (murD)
Enzymes [BR:
gbn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GEOBRER4_04870 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gbn01011
]
Precursor biosynthesis
Amino acid ligase
GEOBRER4_04870 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Shikimate_DH
2-Hacid_dh_C
NAD_binding_7
XdhC_C
HcgC
Motif
Other DBs
NCBI-ProteinID:
BCG45737
UniProt:
A0A6S6LUU1
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All DBs
Position
588056..589414
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AA seq
452 aa
AA seq
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MELKDKKILVVGLAKTGVAVARFLAQAGALVTVTDMREEEALSDVLAELSGLDITYELGR
HVPYSFLMADLIVVSPGVPMDIKPLEMARSQKRRVVSEVELASWFIKAPMVAITGTNGKT
TTTTLTGEVFKACGFETFVGGNIGNPLIELAESGQQVERVVVELSSFQLEGVESFRPEVA
VLLNITEDHLDRYHSFQEYIDAKLRIFENQTSDDFAVLNIDDPLVAACASKLKAQFFPMS
REHELEEGISYRDGFITFSHKGKVLRFGTEGFKLKGVHNLDNIMASLAATLLMRCDGDCA
YQAVKNFKGLPHRMELVEEIDGVAYYEDSKGTNVGSVVKSLESFESGITLIAGGKDKGGS
YEPLAPLVESRVSHLVLIGEAKARMNEALGALTDTHLAQTLEEAVEIARRLTKPGGVVLF
SPACSSFDMFKNYEERAERFKAAVRAGKKGEA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaggacaagaaaatactggtggtgggactggcgaagaccggcgtggcggtg
gcccgcttcctggcccaggccggagccctggtcaccgttaccgacatgcgcgaggaggag
gcgctctccgacgtcctggccgagctctccggcctggacataacttacgagctcgggcgg
cacgtcccctacagcttcctaatggcggacctgatcgtggtctcccccggtgtccccatg
gacataaagcccctggagatggcgcgctcccagaagcggcgcgtggtcagcgaggtggag
cttgcctcctggttcatcaaggcccccatggtcgcgatcaccgggaccaacggcaagacc
acgacgacgaccttgaccggcgaggtcttcaaagcctgcggcttcgagaccttcgttggc
ggcaacatcggcaacccgctgatcgagctggccgaaagcggtcagcaggtggagcgggta
gtggtggagctctcttccttccagctggaaggggtggaaagcttccggccggaggtagcg
gtactcttgaacatcaccgaggaccacctggaccgctaccacagcttccaggagtacatc
gacgcgaagctccgcatcttcgaaaatcagacctccgacgacttcgccgtgttgaacatc
gacgacccgctggtagccgcctgtgcctcgaagctcaaggcgcagttcttccccatgagc
cgtgagcacgagctggaggaggggatcagctaccgcgacggtttcatcaccttctcccac
aaggggaaagtgctccgcttcggcaccgagggtttcaagctgaaaggcgtgcacaacctg
gataacatcatggcgagcctcgcggcgacgcttctcatgcgctgcgacggcgactgcgcc
taccaggcggtgaagaacttcaaggggctcccgcaccggatggaactggtggaggagatc
gacggcgtcgcctactacgaggacagcaaggggaccaacgtcgggagcgtggtgaagtcc
ctggagagcttcgagtctggcatcaccctgatcgccggcggcaaggacaagggaggctcc
tatgagccgctcgcccccctggtcgagagccgggtgagccacctggtgctgatcggcgag
gcgaaggcccgcatgaacgaggcgctcggcgcgcttaccgatacccatctcgcccagacc
cttgaggaggcggtggagatagccagaaggctcaccaagccgggcggcgttgtcctcttc
tcgccggcctgttccagcttcgacatgttcaagaactacgaggagcgcgccgagcgcttc
aaggccgcggtgcgcgccggcaagaagggggaggcgtga
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