Citrifermentans bremense: GEOBRER4_04920
Help
Entry
GEOBRER4_04920 CDS
T07006
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00470
D-Amino acid metabolism
gbn00550
Peptidoglycan biosynthesis
gbn01100
Metabolic pathways
gbn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEOBRER4_04920 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GEOBRER4_04920 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GEOBRER4_04920 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbn01011
]
GEOBRER4_04920 (ddl)
Enzymes [BR:
gbn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GEOBRER4_04920 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gbn01011
]
Precursor biosynthesis
Amino acid ligase
GEOBRER4_04920 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp
GARS_A
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
BCG45742
UniProt:
A0A6S6LV17
LinkDB
All DBs
Position
594019..594936
Genome browser
AA seq
305 aa
AA seq
DB search
MTVEELKKKKIAVLMGGLSAEREVSLNSGKAVLASLVRQGFQAVGIDVGRDLPKRLAEEQ
VEVAFIALHGRFGEDGSVQGLLELMGIPYTGSGVLASALAIDKIASKVIFASAGLKLAPY
QVLRRGEELQLANPLPVVVKPSREGSSVGVGIVRDPSRMQAALDEAFRYDSEILIEGFID
GREVQVGILDGKALGAIEIIPKGEFYDYEAKYTDGGAQHILPARLPEAVYAEVLRQGEKA
HAALGCDCYSRVDFLVTETGDCFLLEVNTLPGMTDLSLLPEIAGGAGISFGELVLRILQA
ASLKI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagaggagctgaaaaaaaagaagatcgcggtgctgatgggtggactttccgcc
gagcgcgaggtgtcccttaacagcggcaaggcggtccttgcttccctggtcaggcagggg
ttccaggcggtcggtatcgacgtcggtcgtgaccttcctaagcggctggccgaggagcag
gtggaggttgccttcatcgcgctgcacggacgcttcggcgaggacggctccgtacagggg
ctcctggagctgatggggatcccctacaccggttccggggtgctcgccagcgcgcttgcc
atcgacaagatcgcctccaaggtgatctttgcctccgccgggctgaagctcgccccctac
caggtgctgcgccggggcgaggagcttcagctcgccaacccgctcccggtggtggtgaag
ccctcccgtgaaggctcttcggtcggagtcggcatcgtgcgcgacccctcccggatgcag
gctgcgctcgacgaggcgttccgctacgattcggagatcctcatcgaggggttcatcgac
ggccgcgaggtgcaggtcggcatactggacggcaaggcgctcggcgccatcgagatcatc
cccaagggggagttctacgactacgaggccaagtacaccgacggcggcgcgcagcacata
ctcccggcgcgcctccccgaggcggtgtacgcggaggtgcttcggcagggggagaaggcg
cacgcggcgcttgggtgcgactgctacagcagggtcgacttcctggtcaccgagacgggc
gactgcttcctcctcgaggtgaacaccctcccggggatgacggacttaagcctgcttccc
gagatagcggggggagccggaatttccttcggcgagttggtgctgcgcatactgcaggct
gcttcgctgaagatctag
DBGET
integrated database retrieval system
