Citrifermentans bremense: GEOBRER4_05790
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Entry
GEOBRER4_05790 CDS
T07006
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbn03021
]
GEOBRER4_05790 (rpoH)
Transcription machinery [BR:
gbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEOBRER4_05790 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
HTH_17
UCR_14kD
HTH_20
PgaD
SecM_small
HTH_25
Motif
Other DBs
NCBI-ProteinID:
BCG45829
UniProt:
A0A6S6LWL0
LinkDB
All DBs
Position
702444..703301
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AA seq
285 aa
AA seq
DB search
MTHTMPVPIDNLTLYLTEINRFPLLSADEEMDLATRFRREGDLEAAHRLITSNLRFVVKI
AGEYRSYGMKMLDLIQEGNIGLMMAVRKFDPEKGVRLISYAVWWIRAYIQNHIISAWSLL
KIGTTQAQRKLFFKLNQAKQAIINMTGEGDLHAAAISLDVKDTEAQEMEQRLRGELSLDV
EMFEGEGGGTFLESLPDLRQNQEEMLAERQETTILEQNVASALENLNEKERFVIEQRVAA
ENPMTLQEIADHFSISRERVRQIEEGALKKMKRLLTPLVMEAEAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaccatgccggtacctattgacaacctgaccctttacctcacggagatcaac
cggtttccgctgctttcggcggatgaggaaatggatttggctaccaggttccgtcgcgag
ggagacctggaggcggcgcaccggctgatcacctccaaccttcgtttcgtggtgaaaata
gcaggcgaataccgctcctacggcatgaagatgctcgacctgatccaggaggggaacatc
gggctgatgatggcggtcaggaagttcgacccggagaagggggtgcgccttatctcctac
gcggtctggtggatccgggcctacatccagaaccacatcatctccgcctggagcctgttg
aagatcgggaccacgcaggcacagagaaagctgttcttcaagctgaaccaggccaagcag
gcgatcatcaacatgaccggcgaaggggacctgcatgctgcagccatctcgctggacgtg
aaggacaccgaggcacaggagatggagcaacgcctccggggtgagctttcactcgacgtg
gagatgttcgaaggcgaggggggagggaccttcctggagagccttccggatctgcggcag
aaccaggaggagatgctggccgagcgccaggagaccacgatcctggagcagaacgtcgcc
agcgcgctggaaaacctgaacgagaaagagcgcttcgtcatcgaacagcgcgtagccgcg
gaaaacccgatgaccttgcaggaaatagccgatcatttctccatctcgcgggagcgggtg
cgccagatcgaagagggtgcgctcaagaagatgaaacgcctcctcaccccgctggtgatg
gaagccgaggcggcgtaa
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