Citrifermentans bremense: GEOBRER4_08780
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Entry
GEOBRER4_08780 CDS
T07006
Symbol
frdB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00020
Citrate cycle (TCA cycle)
gbn00190
Oxidative phosphorylation
gbn00650
Butanoate metabolism
gbn00720
Other carbon fixation pathways
gbn01100
Metabolic pathways
gbn01110
Biosynthesis of secondary metabolites
gbn01120
Microbial metabolism in diverse environments
gbn01200
Carbon metabolism
Module
gbn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GEOBRER4_08780 (frdB)
00650 Butanoate metabolism
GEOBRER4_08780 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GEOBRER4_08780 (frdB)
00720 Other carbon fixation pathways
GEOBRER4_08780 (frdB)
Enzymes [BR:
gbn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GEOBRER4_08780 (frdB)
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GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_9
Fer4
Fer4_17
Fer4_10
Fer4_2
Fer4_21
Fer4_6
Fer4_4
Fer2
Fer4_16
Fer4_3
Fer4_18
Fer4_15
Fer4_13
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
BCG46128
UniProt:
A0A6S6LXU8
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All DBs
Position
1046166..1046930
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AA seq
254 aa
AA seq
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MSHHESHGMNLTLHVWRQAGPDAPGKLEQYEAKNVSPDQSFLEMLDEVNEQLIKAGKDPI
AFDHDCREGICGMCSQVINGVPHGGQERTTVCQLHMRRFSDGDTIYIEPWRALAFPIQKD
LIVDRGALEKIMQAGGYTSCHTGGVADGNALLVPKPDADYAMDAAECIGCGACVAACPNG
SAMLYTSAKVAQLAALPQGKAEAAERVCNMTEAMQAAGFGNCSNHYECQAACPKGINVKF
IAKLNREYQKALFK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccacgaaagccatggaatgaaccttactttacacgtatggcgccaggccggg
cctgacgcgccggggaagctggagcagtacgaggccaaaaacgtaagccctgaccagtcc
tttctggagatgctcgacgaagtgaacgagcagctcatcaaggccggcaaggacccgatc
gcatttgaccacgactgccgcgagggtatctgcggtatgtgctcgcaggtcatcaacggg
gttccgcacggcgggcaggagcgcaccaccgtctgccagctgcacatgaggcgcttcagc
gacggcgacaccatctacatcgagccgtggcgtgccctcgccttcccgatccagaaggac
ctgatcgtggacaggggcgctctggagaagatcatgcaggcaggcggctacacctcctgc
cacaccggcggcgttgccgacggcaatgccctgctcgtaccgaaaccggacgcggactac
gccatggatgctgccgagtgcatcggctgtggcgcctgcgtcgccgcctgcccgaacggc
tccgccatgctctacacctccgcgaaggtggcacagttggctgccctgccgcagggtaag
gcagaagccgccgagcgcgtatgcaacatgaccgaggccatgcaggcagcgggctttggc
aactgctccaaccactacgagtgtcaggcagcctgcccgaaagggatcaacgtcaagttc
atcgccaagttgaaccgcgagtaccagaaggcgctgttcaagtaa
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