Citrifermentans bremense: GEOBRER4_09610
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Entry
GEOBRER4_09610 CDS
T07006
Symbol
ihfB-2
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbn03032
]
GEOBRER4_09610 (ihfB-2)
03036 Chromosome and associated proteins [BR:
gbn03036
]
GEOBRER4_09610 (ihfB-2)
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_09610 (ihfB-2)
DNA replication proteins [BR:
gbn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GEOBRER4_09610 (ihfB-2)
Chromosome and associated proteins [BR:
gbn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GEOBRER4_09610 (ihfB-2)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GEOBRER4_09610 (ihfB-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Ribosomal_L27_C
HU-CCDC81_euk_2
HTH_78
Motif
Other DBs
NCBI-ProteinID:
BCG46211
UniProt:
A0A6S6M3I2
LinkDB
All DBs
Position
1132872..1133153
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AA seq
93 aa
AA seq
DB search
MTKSELIDKLVEVRGVLTRKDSEAVVSMVFDAMSEALTSGDKVEIRGFGSFTIRDREPRE
ARNPKSGEIVSIPSKKTPFFKTGKDLRERVNNL
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagcgaactgatcgacaagctggttgaagtacgtggcgtgctgacccgcaag
gactccgaggccgtcgtttccatggtgttcgacgccatgagcgaggcgctcaccagcgga
gacaaggtagagatccgcggttttgggagcttcaccatcagggatcgcgagccgcgtgag
gcaaggaacccgaagagcggcgagatcgtcagcatcccgtccaagaagaccccgtttttc
aagaccggcaaggatcttagggagcgggtgaacaacctgtag
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