Citrifermentans bremense: GEOBRER4_13050
Help
Entry
GEOBRER4_13050 CDS
T07006
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gbn03009
]
GEOBRER4_13050
Enzymes [BR:
gbn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GEOBRER4_13050
Ribosome biogenesis [BR:
gbn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GEOBRER4_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Cons_hypoth95
PCMT
Methyltransf_11
RrnaAD
TPMT
Methyltransf_32
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BCG46555
UniProt:
A0A6S6M586
LinkDB
All DBs
Position
complement(1506914..1508212)
Genome browser
AA seq
432 aa
AA seq
DB search
MANHEGTRVLVAGGLPGEVLVAKITYVGRREAFANTIKCLKRSPDRNPSPACTLGRVCDG
CGLMQMRYPAQLAWKKALVARHFRKYSSLYEVPVRETIGSPRELGYRNTAKLVIAGKNND
PVIGIYRRNTHDVLEIEDCALHHPLINKVVKAAKAGIKKGKVQIYNPKSEMGLLRYLVVR
VAEKSNQAMVVLVTTDQGYNEMHHLAKFIQQAVPEVAVVAQNINTSTGNVIFGTKDRSIT
KAQTLKAFVGDKIFNLSPHSFFQVNSGAARIIYEKVRELANLRGTERVIDVYCGIGGISL
FLADRAREVVGIEFVEAAVADATINAALNHVENCHFEAGDAAHLIDEIGEEGGADLIVLN
PPRKGCDEKVLKSVAAIKPPRIIYVSCSPETLARDLDILSGLGYRTAEVQPVDMFPQTVH
VEDVALLELRQA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccacgaaggaacccgcgtgctggtggcaggggggcttccgggcgaggtgctg
gtggcgaaaatcacctacgtcgggcgcagggaagccttcgccaacaccatcaagtgcctg
aagcgttccccggaccgcaacccctcccccgcctgcacgctgggacgtgtatgcgacggt
tgcggattgatgcagatgcgctacccggcccagctggcgtggaaaaaggcgctggtcgcg
cgccacttcaggaaatactcctctctttacgaggtacccgtcagggaaaccatcggctcc
cccagggaacttggctatcgcaacaccgccaagctggtcatcgccgggaagaacaacgat
ccggtgatcggcatctaccgtcgtaacacacatgacgtgctggagatcgaggattgcgcg
ctgcaccacccgctcatcaacaaggtggtgaaggctgccaaggccgggatcaagaaggga
aaggtgcagatctacaaccccaagagcgagatggggcttttgcgctaccttgtggttcgc
gtggccgagaagagcaaccaggccatggtggtgctggtgacgacggaccaggggtacaac
gagatgcaccacctggcgaagttcatccagcaggcggtccccgaggtcgcggtggtggca
cagaacatcaacacctcgaccggcaacgtgatcttcggcaccaaggaccgctccataacc
aaggcgcagacgctgaaggcgttcgtgggagacaagatcttcaacctctcgccccattcc
ttcttccaggtcaacagcggcgcagcgcgcatcatctacgagaaggtgcgggagttggcg
aacctcagggggaccgagcgggtcatcgacgtctactgcggcatcggcggcatctcgctg
tttctggccgaccgggcgcgcgaagtggtcggcatcgagttcgtcgaggcagccgtcgcc
gacgctaccatcaacgcggcgttgaaccacgtggagaactgccacttcgaggcgggcgac
gccgcacacctgatagacgagatcggcgaggaaggaggcgccgacctgatcgtactcaac
ccgcccaggaaagggtgcgacgagaaggtgctgaaaagcgtggccgccatcaagcccccc
cgcatcatctacgtttcctgttcgccggaaacgctggcgcgtgacctcgacatcctctcc
gggctcgggtaccgcaccgcggaggtgcagccggtggacatgttcccgcagacggtgcat
gtcgaggacgtcgcgctgctggaattgaggcaggcttaa
DBGET
integrated database retrieval system
