Citrifermentans bremense: GEOBRER4_18450
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Entry
GEOBRER4_18450 CDS
T07006
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03030
DNA replication
gbn03430
Mismatch repair
gbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEOBRER4_18450
03430 Mismatch repair
GEOBRER4_18450
03440 Homologous recombination
GEOBRER4_18450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbn03032
]
GEOBRER4_18450
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_18450
Enzymes [BR:
gbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEOBRER4_18450
DNA replication proteins [BR:
gbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEOBRER4_18450
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEOBRER4_18450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BCG47095
UniProt:
A0A6S6M6U2
LinkDB
All DBs
Position
2092651..2093589
Genome browser
AA seq
312 aa
AA seq
DB search
MKGAKKRESGMNALEIEVAIAALHSTGDYLVLRRLNLARDSRLARKAPERCHVALCLDTE
TTGLDYRRDKVIELGIVAFEFDPETGEIFRISERYSGFEDPGFPIPAEVVEITGISDEMV
RGQAFDDAFVNLLAQKSHLVIAHNAAFDRKFVEARFPAFAKLPWACTVSQIDWGTERVSS
RTLEYLLFKTASLTINAHRALDDAEGVLGLLLERLPVTGAPIFRTLLKRAHEVTSRLYAV
SAPFDKKDLLKDRGYRWSDGSQGGSKAWWRDVPAEAEPEELAYLASEIYPRGNTSAVQIM
RCDAYARFSVRE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagctaagaagagagaatcgggcatgaacgcgctggagatagaggtggccatc
gccgcgcttcattccacaggggactacctggtgttgcggcgccttaacctcgcgcgcgat
tcgcgcctcgcccgcaaggccccggagcgctgccacgtagccctttgcctcgacaccgag
accacggggctcgactacaggcgggacaaggtgatcgagctcggcatcgtcgccttcgag
ttcgatcccgagaccggggagatcttcaggatctccgagcgctactccggcttcgaggac
ccggggttccctattccggcagaggtcgtggagatcaccggcatatccgacgagatggtg
cgcgggcaggcgtttgacgacgccttcgtaaacctcctggcgcagaagtcccacctggtg
atcgcccacaacgccgccttcgaccggaagttcgtcgaggcgcgtttccccgcgtttgca
aagctgccctgggcctgcaccgtgtcccagatcgactgggggacggagagggtttcctcg
cgcacgctggaatacctcctcttcaagaccgcctccctcaccatcaacgcgcaccgtgcc
ctcgacgacgccgagggggtgctggggctgttgctggagcgtcttccggtcaccggcgcg
cccatcttccgcaccctgttgaagcgggcgcacgaggtcacctctcggctttacgcggta
tccgcccccttcgacaagaaggatctcctcaaggaccgcggctatcgctggagcgacggt
tcccagggggggagcaaggcctggtggcgcgatgtgccggcggaggcggagccggaggag
ctggcctatttggcgagcgagatctaccccagggggaacacgagcgcagtgcagataatg
aggtgcgacgcctacgccaggttctccgtcagggagtaa
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