Citrifermentans bremense: GEOBRER4_21730
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Entry
GEOBRER4_21730 CDS
T07006
Symbol
birA
Name
(GenBank) bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00780
Biotin metabolism
gbn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
GEOBRER4_21730 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gbn03000
]
GEOBRER4_21730 (birA)
Enzymes [BR:
gbn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
GEOBRER4_21730 (birA)
Transcription factors [BR:
gbn03000
]
Prokaryotic type
Helix-turn-helix
Other families
GEOBRER4_21730 (birA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
BPL_LplA_LipB_2
HTH_24
MarR_2
HTH_AsnC-type
LplA-B_cat
HTH_IclR
Rrf2
YdaS_toxin
HTH_10
Fe_dep_repress
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
BCG47423
UniProt:
A0A6S6M0T1
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All DBs
Position
complement(2498097..2499080)
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AA seq
327 aa
AA seq
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MKESGVDGRILELFRSGDGVVSGAALSKALGVSRTAVWKHVKGLRVKGYQIEAVPSKGYR
LLSSPEILTNLDITAGLATKRIGSSILCLKETDSTNSVAFKMAEEGAPEGTVVIADTQSA
GKGRLGRVWLSPPGVNLYCSVVLRPAIAPVAACQLTFLSVVAVARAVERCTKLKPQIKWP
NDILINGKKVAGLLNEMNAETEKVNFVVLGIGVNLNLRMSTLSQGLLRHPATSLLEEGGE
EVDRIRFTRVLLEELDQLYGDFLVEGDGPVRAEWLARSAIKGRSVKVSQQNREFRGVVQG
VDSFGALLVLLSDGTLETVLSGDVALL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaatccggtgtagacggaaggatcctggaactgttccgctccggcgacggggtg
gtatccggcgccgcgctgagcaaggcgctgggcgtttcgcgcaccgcagtctggaagcac
gtcaaggggttaagggtcaaagggtaccagatcgaggcggttccctccaaggggtaccgg
ctcctctcctcccccgaaattctcaccaatctcgacatcaccgccggcctcgccacgaag
aggatcggctcttcgatactctgcctgaaagagaccgattccaccaactcggtcgccttc
aagatggcggaggagggtgcgcccgaagggaccgtcgtcatcgccgacacccagtcggcg
ggcaaaggtaggctggggcgggtctggctgagccctccgggggtgaacctttactgctcc
gtggtgctgcgccccgcaatcgcgcccgtcgccgcctgccagctcaccttcctctcggtc
gttgccgtggcccgtgccgtcgagcgctgcaccaagctcaagccgcagataaaatggccc
aacgacatcctgatcaacgggaagaaggtggccgggcttttgaacgagatgaacgctgag
acggagaaggtcaacttcgtggtcctcgggatcggggtcaacctgaatctccgcatgtcc
accctgagccaggggcttttgcgccacccggctacctcgcttcttgaggaggggggggag
gaggtggaccgaatcaggttcacccgagtccttttggaggagctggatcagctctacggc
gatttcctggtggagggggacggaccggtccgggccgagtggctggcgcgctctgccatc
aaggggcgcagcgtcaaagtaagccagcagaaccgcgagttccgcggcgtggtgcagggg
gtcgattccttcggcgcgctcctggtacttcttagcgacggcaccctggaaacggtgctc
tcgggggacgtcgcgctgctctaa
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