Citrifermentans bremense: GEOBRER4_22370
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Entry
GEOBRER4_22370 CDS
T07006
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K16092
vitamin B12 transporter
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbn02000
]
GEOBRER4_22370
Transporters [BR:
gbn02000
]
Other transporters
Pores ion channels [TC:
1
]
GEOBRER4_22370
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BCG47487
UniProt:
A0A6S6LZF5
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All DBs
Position
complement(2566198..2568039)
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AA seq
613 aa
AA seq
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MQPCVYSLLCSVRARLVLLGCTLSMMLCAPPANCDDDLRSLELYNGEGTEVVSGTRSPRP
ASQTAENITVVTAQDIDTINAHTLADVLSYVTGVQLEMTRTPGTPVNFEVQGSNYNHVLV
LLDGVPINNLADNFPDVSSIPVQLIERVEVVKGAASSSWGNALGGVINVITKSPDPERPV
GGVVSASYGQRETLDARAELTGTNNRFGYYLTGGKLRSDGLLPNNMADKNNFYGKLQYAL
PARGSLSLTTAVMDGESGMFGAGVNRANTDSTLIVSTLASQYQLMDHLLVEGALVTTESS
AKLLRQGLVAPGTVGTMAFETEESRLGGNLQLSWLDDLQRITAGIDYEHVSAHMVNGIAL
ADLLNRRADRVGLYLSDTLTLGRFALTPSARFDSTGSAGDHFSPSFGVTYALTENSVLRG
YTSRGYSLTSLNRSASTEKVWTSQLGFETGDIPGLWLKGTLFRNDTWDIISGSTRAITYE
RHVKQGAEIEAKTIPIFRTSLTTGYTYIRGTHGDSGPHLDGVPKHTVQVGLRYQDYSAFQ
AHLNGRFIDWDNPGTGKYGAIIWDLHLRKTVELSETSLEIFASVRNLFNGDQYLDAVYRN
PGRWVELGVRCNF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgtgtgtctattcactcctctgctctgtcagagccaggctggtgctgcttggt
tgcaccctttccatgatgctgtgcgctcctccggcaaactgtgacgacgacctgcgttcc
cttgagctgtacaacggagaggggaccgaggttgtctcagggacccgatcgccgcgtccg
gcatcgcagaccgccgagaatataacagtggtcaccgcccaggacatagacaccatcaac
gcccacaccctggcggatgtcctaagttacgtcaccggcgtgcaactggagatgacgcgc
acccccgggaccccggtgaatttcgaggtccaagggtcgaactacaaccatgtccttgtg
cttctcgacggggtccccatcaacaacctggccgacaacttcccggatgtcagctccatt
ccggtgcagctgatcgagcgagtagaggtcgtgaagggtgcggcttcctcctcctgggga
aacgcgctcgggggggtcatcaacgtaatcactaagtctcctgaccccgagcgaccggtg
ggaggggtggtttcggcttcctacggacaacgtgaaacgctcgatgcgcgggcggagcta
accggaaccaataatcgcttcggctattacctgaccgggggaaagcttcgctccgacggc
cttttgccgaacaacatggccgacaagaacaatttctacggaaagctccagtacgccctg
ccggcccgtggttcgctcagtctgaccactgccgtcatggacggcgaaagcggcatgttc
ggcgccggggtgaaccgggcgaacacggacagtaccctgatcgtttccacgcttgccagt
cagtaccagctcatggaccatctgcttgtcgagggggcactggtgacgactgagtcgagc
gccaagcttttgagacaggggttggttgcccctggcacagtcggcaccatggctttcgag
acggaggagtcccgcctcggaggcaaccttcagctctcctggctggatgacctgcaaagg
atcaccgccggcatcgattacgagcacgtcagcgctcacatggtgaatggtatcgctcta
gccgatctgcttaaccgaagggcggaccgggtcggtctttacctaagcgacaccctcacc
cttgggcgctttgcgctcacgcccagtgcccgcttcgacagcaccggttcggcaggcgac
cacttcagccccagtttcggcgtcacctatgcgctcaccgagaacagcgtcttgcgcggc
tacacgtctagagggtacagtctcacctcgctgaaccgctccgcctcgacggagaaggtg
tggacttcacagcttggattcgagacaggcgacatccctgggctgtggcttaaagggacc
ctgttccgaaatgatacctgggacatcatctccggcagcacgcgcgccatcacctatgag
aggcacgtgaagcaaggggccgagatcgaggcgaagacgattcctattttccggacctct
ctcaccaccggctacacctacatccggggaacccatggtgacagcggcccccatctcgac
ggcgtcccgaagcatacagtgcaggttggcctcaggtatcaggactactcagctttccag
gctcacctgaacggccgtttcatagattgggataaccctgggaccgggaagtacggggct
atcatctgggacctgcacctgagaaagacggtggaattatccgagacctccctcgagatc
ttcgcctcagtacggaacctcttcaacggcgaccagtacctcgacgctgtctaccgcaat
ccgggccgttgggtggagctgggggttagatgcaacttctga
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