Citrifermentans bremense: GEOBRER4_23200
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Entry
GEOBRER4_23200 CDS
T07006
Name
(GenBank) SWF/SNF family helicase
Organism
gbn
Citrifermentans bremense
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
FdhE_N
Motif
Other DBs
NCBI-ProteinID:
BCG47570
UniProt:
A0A6S6M228
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Position
2661847..2666007
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AA seq
1386 aa
AA seq
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MSSPANLTQKLLDTFSSCTPEERTLLQLLSVLYAPLSKNVLLNVLRRMGAPAPGERSYTG
LVLAEVLEKLAHKKLVVQGKDGIRCDIHITHAATLSAVADGAFPQMVSAIHVEIPMETDW
GSSYYRTQLHALRDVRIAFYAKDERLAFEMEARFKRQFPYDLMRCHPFVTICNAPFDLEW
FRSLPIKLQGAALKEILSYAGAHLIPAQPPFALLAELAAAKGVTQELCDVLCVELLLRGE
IDAAEKASGERASSTEAAVFAATQMLRGAYPESAASFESALALLRKETGKRKTFFDNITG
PLYILALIAAGNERSLTQAADFCAFVVGKKDWPHQDLYLILKHVAAERNGERGTSRYLEA
LSAAPAFDTSPFYALFCVMALQWGGSEKAREKAAKLPPLAHKARDAGYLWLADELEWTVL
ECGIAPLPASRTGKRQKQKGVVPLVHAVAKIEFWQTALQALIRLNREEEEAEQKPVSQSR
LIWHFDEKRGYFEIHPREQKQAPNGKWSSGRNISPKRLAEDAAGIDFLTEQDRLICACIK
LERCHGYYGRDCYELNHDLALPLMVGHPQLYLDPAGTVHLELVRGEPEIQLLTEGDTLKL
QISPQFAPDQKIYLQKEAPTRLKMYQVKEEYRRIAAILGSGLKLPPQAKNQALAAIHSLS
SLVTVHSDIEDATIEQIASDSTPCFHLLPYQAGLRLELLVYPLSESGPCFRPGAGGETLM
AVIEGKKVQAKRDLQLEVSRTTEAIAALPVLSECEEWEGEWMVPSTEKALELLLQLQGLG
EAVRVSWPEGARFKIKQVATPGHCRLVIKQAKDWFELEGEVKLNEGLSLDLRQLVELAKD
SPGRFIQLADGDFLALSAQLKRHLDDLASCADPHGSSAFRFHPLAAPVFEEFAGQAGSFD
ADEQWRRQLKRLLEAEAFRPQLPATLQAELRGYQEEGFNWLNRLAHWGVGACLADDMGLG
KTVQALAQILSMAEGGPSLVVAPTSVCLNWESESLKFAPTLNPVIFGGQNRAKLLQELKP
FDLVICSYGLLQQEGELLAAVQWQAIILDEAQAIKNMATKRSQAAMELKGTFKMVATGTP
IENHLGELWNVFRFINPGLLGSLKQFNVKFAAPIEKSQDKKARARLKKLIQPFILRRTKN
QVLEELPPRTEIVIKVEMSEEEASLYEAIRKSALDNLAGVGKVEGKGALHLKILAEIMRL
RRACCNPRLVLPDTPIPSTKLAAFGEIVEELRENRHKALVFSQFVGHLELIRQYVEKNGI
PYQYLDGSTPPQERKKRVDAFQSGSGDLFLISLKAGGVGLNLTAADYVIHMDPWWNPAVE
DQASDRAHRIGQQRPVTIYRLVTRGTIEEKIVGLHQQKRGLADSLLDDSDLSGKISAEEL
LALLRK
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctctccggcgaacctcacccaaaaacttctcgacaccttctcctcctgcaccccc
gaggagaggaccctgctgcaactcctttccgtgctctacgcgcccctatccaaaaacgtc
cttctcaacgtgctccggcgcatgggcgcccccgcccccggagagcgctcctacaccgga
ttggtgctggcggaagtgctggaaaagctcgctcataaaaagctcgtggtccagggaaaa
gacggcatccgctgcgacatccatatcacgcacgccgccaccctgagcgccgtcgccgac
ggggccttcccgcagatggtctcggcgatccacgtagagatcccgatggagaccgactgg
gggagcagctattatcgcacccagctgcacgccctgcgcgacgtccgcatagccttctac
gccaaagacgaaaggctcgctttcgagatggaggcgcgcttcaagcggcagttcccctac
gacctcatgcgctgccaccccttcgtgaccatctgcaacgcccccttcgacctcgaatgg
ttccggtcgcttcctatcaagctgcagggggctgccctgaaggagatcctctcctacgcc
ggcgcgcaccttattccggctcaaccacctttcgccctcctggcagagcttgcggccgca
aagggagtgacgcaggagctatgcgacgtcctctgcgtggaactgctgctgcgaggcgaa
atcgacgccgcagaaaaggcatccggcgaaagggccagctccaccgaggccgcggtcttc
gccgcgacacagatgcttcgcggcgcctacccggaatctgcggcgtcgttcgagagtgcg
ctcgcgctgctgcgcaaggagaccggcaagcggaagaccttcttcgacaacatcaccggc
ccgttgtacatcctggccctcatcgctgccgggaacgaacgctcactgacccaggcggcc
gacttctgcgccttcgtcgtcggcaagaaagattggccccaccaggacctctacctgatc
ctcaagcacgtggccgcggagcgaaacggggagcgcggcacctcccgctaccttgaggcg
ctctccgccgcccccgccttcgacacctcccccttctacgcccttttctgcgtcatggcc
ctgcagtggggcggatccgaaaaagcgcgtgagaaggctgcaaagctgcccccgttggcc
cacaaggcacgcgacgcaggatacctgtggcttgccgacgagttggagtggactgtgctt
gagtgcggcatcgcccctttgcccgcttcccgaaccggaaagcgccaaaaacagaagggg
gtcgtccccctggttcacgccgtagcgaagatcgagttctggcaaaccgccctccaggcg
ctgatcaggctgaaccgcgaggaggaagaggcggagcaaaagccggtatcgcaatcccga
ctcatctggcacttcgacgagaagcgcggctacttcgagatccatccgcgcgagcaaaag
caggcgccgaacggtaaatggagctccgggagaaacatctccccgaaacgtctggccgaa
gacgcggcgggtatcgatttcctcaccgagcaggaccggctcatctgcgcctgcatcaag
ctggaacgctgccacggctattacggccgggactgctacgagctgaaccacgacctggcc
ctgccgctcatggtcgggcacccgcagctctacctcgacccggcgggcacggtgcacctg
gaacttgtacgtggtgagccggagatccaactccttactgaaggcgacacccttaagctg
caaatctctccgcagttcgcgccggatcagaagatctacctgcaaaaggaggccccgacc
cggctcaagatgtaccaggtgaaggaggagtaccgccgcatcgccgccatcctcggcagc
gggctgaagctcccgccgcaggcgaagaaccaggccctcgcagcgattcattccctctct
tcgctggtcacggtgcactcggacatcgaggatgcgaccatcgaacagatagcgagcgac
agcaccccctgcttccatcttctcccctaccaggccgggctgaggctggagctgctggtc
taccccctgtccgaaagcggcccctgcttccgccccggggccggcggcgaaacgctcatg
gccgtcatcgaagggaaaaaggtgcaggccaagcgggacctgcagctcgaggtaagccgc
acgaccgaagcgatcgcagccctacccgtcctctccgaatgcgaggaatgggagggcgag
tggatggttccctcgaccgaaaaggcgctcgaactgctgcttcaactccaggggctcgga
gaagctgtgcgcgtttcctggccggaaggggcgcgcttcaagatcaagcaggtcgcgacc
cccggacactgccggctggttatcaagcaggcgaaagactggttcgaacttgaaggcgaa
gtgaagctgaacgaggggctctcgctagatctgcggcaactggtcgagctcgccaaggat
tccccaggccgcttcatccagcttgcagatggcgatttcctggctctctccgcccagctc
aaaaggcacctggacgacctcgcctcctgcgccgatccgcacggcagcagcgctttccgt
ttccatcccctcgccgcccccgtcttcgaggaattcgccgggcaggccgggagcttcgac
gcggacgagcagtggcggcgccaactcaaaaggctgctcgaagccgaggccttccgcccc
cagctccccgccacgctccaggcggaactgcgcggctatcaggaggaagggttcaactgg
ctgaaccggctggcccactggggggttggagcctgtctcgccgacgacatgggactgggt
aaaacggtccaggcgctggcacaaatcctttccatggcggagggggggccctcgctggtg
gtcgctcccacctcggtctgcctcaactgggagagcgagagcctcaagttcgcccccacc
cttaatcccgtcatcttcggtggccaaaaccgcgcgaagctcctccaggagctgaagccc
ttcgacctggtcatctgcagctacgggcttttgcagcaggagggggaacttctggccgcg
gtgcagtggcaggcgatcatcctggacgaggcgcaggcgatcaaaaacatggcgaccaag
agaagccaggccgccatggagctaaagggcaccttcaagatggttgccacagggaccccc
atcgagaaccacctgggggagctctggaacgtgttccggttcatcaaccctggacttttg
gggagcctgaagcagttcaacgtcaagttcgccgcgccgatagaaaagagccaggacaag
aaggcccgcgcacgtctgaagaagctgatccagccctttatcctgcgccgcaccaagaac
caggtgctggaggagctcccgccgcgcacggagatcgtcatcaaggtagagatgagcgag
gaggaggcgtcgctgtacgaggcgatcaggaagagcgcgctcgacaacctggccggcgtc
ggaaaggtcgagggaaagggcgcgctgcacctgaagatccttgcggagatcatgaggctt
cggcgtgcctgctgcaacccgcgcctggtcctgcccgacacccccatcccgagcaccaag
ctggccgccttcggtgagatcgtggaggagctgcgcgagaaccgccacaaggcccttgtc
ttcagccagttcgtcggacacctggagctgatccggcagtacgtagagaagaacgggatc
ccctaccagtacctcgacggcagcacgcccccccaggagcggaagaagcgcgtcgacgcc
ttccaaagcggcagcggcgacctgttcctgatcagcctcaaggccggcggcgtcggactc
aacctcaccgccgcagactacgtcatccacatggacccctggtggaatccagcggtcgaa
gaccaggcctccgaccgcgcccaccgcataggtcagcagcgcccggtcaccatctaccgg
ctggtgaccagggggaccatagaagagaagatcgtcggtctgcaccagcaaaagcgcggc
ctggccgacagcctgctcgacgatagcgacctgagcggcaaaataagcgcagaagagctg
ctggcgctgctgcggaaatag
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