Citrifermentans bremense: GEOBRER4_25720 Help Entry GEOBRER4_25720    CDS       T07006                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism gbn  Citrifermentans bremense Brite KEGG Orthology (KO) [BR:gbn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:gbn03400]     GEOBRER4_25720 Enzymes [BR:gbn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      GEOBRER4_25720     5.6.2.6  RNA 3'-5' helicase      GEOBRER4_25720 DNA repair and recombination proteins [BR:gbn03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     GEOBRER4_25720 SSDB OrthologParalogGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr Helicase_C WHD_3rd_Lhr ResIII Cas3-like_C_2 PhoH DUF6406 Motif Other DBs NCBI-ProteinID:  BCG47822 UniProt:  A0A6S6M0E0 LinkDB All DBs Position 2963713..2968215 Genome browser AA seq 1500 aa AA seqDB search MSEDVLKYFHPLIAGWFRETLGEPTLVQSRAWSEVMQERHVLVTAPTGSGKTLAAFLWAI NQLATGAWERGETRVLYVSPLKALNNDVRRNLIAPLSELRDYFARNGVPFPEIGVQTRSG DTPGDERRRMLRHPPEILITTPESLNILLTSKGSRVTLTGVATIILDEIHAVAGSKRGTH LITAVERLVLLSGEFQRIALSATVRPLETVADFVGGLTQAGREHLPRPVSIVRGDRAKRF SLTISAPEEAGDQRAADEFWPALSARFAQIIAEHRSTLFFANSRRTTEKVTRLINELSGE ELAYSHHGSLSREIRLAVEERLKRGELKAIVATNSLELGIDIGRLDSVVLIQTPRSISSA IQRIGRSGHGVGEVSSGMLFPTYGMDFVSAAVIARAIADGEIEEIRPVETPLDLLAQIVL SMALPETWQLDDLYDFLKGCYPYRNLSRQQFDLVIGMLEGRYADSRVPELRPRATVDRLE GTISTRPALSMLVFMEGGTIPERGYFELRLKESGAKIGELDEEFVWERRIGDSFALGAQV WQITDVTHSTVLVVPARKSQQIIPFWRAEELDRDFFYSEKIASFLEYSNGRLSSKGLVEE LVRRHFMDEPAAQSLESYLKRQREATGADLPHRHHLLVEQYHDPLGGAETQQVILHTLWG NSINRPFTFALCAAWEEHFGYPLQAFYNNDGIALLLPHELDAPGRILRLVEPERIEALLR GTLETTGYFGARFRENAGRALLLSRSNFKRRMPLWLNRLRSKKLFASTARYRDFPVLLET WRSCLQDEFDLTNLRLLLEEIQDGSIRITKVKTTTASPFAQGLIWLQTNKYVYEDDTPAG LGKSALGQDLLKELVFASHLRPRLPAELIRLFEAKRQRTAPGYAPDSARELADWVKERLL TPQTEWLELLEAVQRDSGVAPAELLPQLAERVVVLGLPGGSVPLVASVEMLPEIARGLSL NWQEIALSPLVDQEGLRERLQGAAETLAERGASRVEAEEEEPPDVKLIGRWLAYHGPVEL ANLQRMLGLGDEQLREPLHSLEEEGQVLVDQLGETSTAPEICDAANLEALLRMLRRSRKP PFEALELPYLPLFLACFQGIAPPGSSPDDLRERLEQLLGVPLAAQLWEEEVLPARLQPYF GAWLDSAMQGSDLLWFGCGKRKLSFAFPEDLDLFRPEPSGPQQDEEAEDESVIADADAAA RLIRDPRGHYSLFAICSSSGLSAAQATEELWKGAWSGELSNDSFASVRKGILNRFERREP EPGQGRHLHRVPGSRWGRAQEGAGSWYLLPRPEGEQDVLELEERNKDRVRLLLGRYGILF RELLLRELPPLQWGRLFRSLRIMEMSGEVMSGNFFNGIPGLQFVSHEAYRKLEAGIDEER IYWINAADPVSLCGSGLEGVREELPPRLPSTHLVYHGTGLALISRRFGKELEFKVPPDHP QLFDYLSFFKVLLSRDFNPRKSIAVERINGEPAGDSRYAAALLAFGFQRAYSGLELWRSY NT seq 4503 nt NT seq  +upstreamnt  +downstreamnt atgtccgaagacgtccttaaatatttccacccgctgatagccggctggttcagggagacc ctgggggaaccgacactggtacagtcgcgtgcctggagcgaggtgatgcaagagcggcac gttctggtgactgcgccgaccggaagcggcaagacgctggccgcatttctgtgggccatc aaccagctggcgaccggggcctgggagcgcggggaaaccagggtgctctacgtctcccct ctgaaggctttgaacaacgacgtgcgccgcaacctgatcgcgccgctttccgagctgcgc gattactttgcccggaacggcgtccccttcccagagatcggcgtgcagacccgcagcggg gacaccccgggcgacgagcgcagacgcatgctgcgccatcctcctgagatcctgatcacc actcccgaaagcctcaacatcctcctcacctcgaagggaagcagggtgacgctcaccggc gtcgccaccatcatcctggacgaaatccacgccgtcgccgggagcaagcgcgggacgcac ctgatcacggcggtggaaaggctggtgcttctaagcggcgagttccagcgcatcgcgctt tcggccacggtaaggccgctggaaacggtggcggatttcgttggggggctcacgcaagcc ggaagggagcatctcccccggccggtctccatcgtcaggggcgaccgcgccaagcgtttc agcctcaccatcagcgcacccgaggaggccggcgatcagcgcgctgcggacgagttctgg cccgcgctctcggcccggttcgcccagatcatcgcagagcaccgctccaccctcttcttc gccaacagcaggcgcaccacggaaaaggtgacccgcctgatcaacgagctctccggggaa gagctcgcctattcccaccacggctcgctgtcccgcgagatccgcctcgccgtcgaggag cggctcaagcgcggggagctgaaggcgatcgtggcaacgaactcgctggagctcggcatc gacatcgggcggctggacagcgtggtactgatccagacgccccgctccatctcctcggcg atccagcgtatcggccgctccggtcatggcgtcggcgaggtgagctcggggatgctcttt cccacctacggcatggacttcgtctcggcggcggtcatcgctcgcgccatcgccgatggg gagatcgaggagatccgcccggtggagacccccctcgacctgctggcccagatcgtcctc tccatggctctccccgaaacctggcagctggacgatctctacgacttcctgaaaggttgc tacccgtaccggaacctttcccggcaacagttcgatctcgtcatcgggatgctggagggg aggtacgccgattcccgggtcccggaactgcgccccagggcgacggtggaccgcctggag gggaccatctccactagacccgcgctttccatgctcgtattcatggagggggggaccatc ccggagcgtgggtacttcgagctgcggctgaaagagagcggcgcgaagatcggggagctg gacgaggagttcgtctgggaacggaggatcggggacagtttcgcgctgggggcgcaggtc tggcagataacggatgtgacccacagcacggtgctggtggtcccggccaggaagtcgcag cagatcatccctttttggcgtgcggaagagcttgaccgcgatttcttctactcggagaag atcgcgtcgttcctggagtacagcaacgggcggctctcaagcaaggggctggtcgaggaa ctggtgcggcgccacttcatggacgagcctgcggcgcagtcactggagagctacctcaag cggcagcgggaggcgaccggggcggacctcccccaccgccaccacctgctcgtcgagcag taccacgacccgctggggggcgccgaaacgcagcaggtcatcctgcataccctttgggga aacagcatcaaccgccccttcaccttcgcactttgcgccgcctgggaagagcatttcggc tacccgctgcaggctttttacaacaacgacggcatagcgctcctgctcccccacgaactg gacgccccgggccggatcctgcggctggtggagcccgagcggatcgaggccctattgcgc ggcacgctggaaactaccggctatttcggcgcccgcttccgggagaatgccggtcgcgcc ctgctcctttcgcgcagcaacttcaagagaaggatgccgctttggttgaaccgactccgt tccaagaagctcttcgcctcgactgccaggtaccgcgacttcccggtgctcctggagacc tggcgctcctgcctccaggacgagttcgatctcacgaacctgagactgctcctggaggag atccaggacggaagcatcaggatcaccaaggtgaagaccacgaccgcctcccccttcgca caggggctgatctggctgcagaccaacaagtacgtctatgaggacgacacgccggcgggc ctgggcaaatcggcgctcgggcaggaccttttaaaggaactggtcttcgcctcccacctg cgcccccgcctccctgccgagttgatccggctcttcgaggcgaaaaggcagcggaccgcc ccaggctacgcccccgatagcgcgcgtgaactggcggactgggtgaaggagcgcctgctg accccgcaaacggagtggctggagcttctggaggccgtgcagcgcgactccggcgtcgcg cctgcggagctcctgccgcagttggcggaacgggtggtggtgctggggctgccgggaggc tcggtcccgctcgtcgcctcggtggagatgctcccggagatagcgcgggggctgtcgctc aactggcaggagatcgccctgtcgcccctggtggaccaggaggggctgcgggaacggctg cagggggcggcggagacgctggccgaacggggagccagccgggtggaagcagaggaggaa gagccgcccgacgtgaagctgatcgggaggtggctcgcctaccacgggccggtggagctt gccaacttgcagcggatgttggggctcggggacgaacagctccgggagcccctgcattca ctcgaagaagaggggcaggtgctggtggaccagttgggcgagacgagcaccgctcccgag atctgcgatgcggcgaacctggaagcgctgctgcggatgctcaggaggtcgaggaagcct cccttcgaggcgctggagcttccctacttgccgctctttctcgcctgcttccaggggatc gccccacccggatcatctcccgacgatctccgggagaggctggagcagttgctgggggtt ccgcttgcggcgcagctttgggaggaagaggtgctgcctgcgcgcctgcagccctacttc ggcgcctggctggacagcgccatgcagggaagcgacctcctctggttcggctgcggcaag aggaagctctccttcgcctttccggaggatctcgaccttttccggccggaaccttcaggg ccgcaacaggatgaagaagcggaggatgaatcggttattgccgatgcagatgccgccgcg aggctgatacgcgacccaagggggcactacagcctcttcgccatttgctccagttccggc ctctcggcggcgcaggcgacggaggagctttggaagggggcctggagtggggagttgagc aacgattccttcgcttcggtgagaaaggggatcttgaaccggttcgagcggcgcgagccg gaaccgggtcaggggaggcatctgcacagggtcccggggagccgctggggccgcgcgcag gagggagcgggaagctggtacctgctgccgcgcccggagggggagcaggacgtgctggag ctggaggagaggaacaaggaccgggtcaggctgctgctggggcgctacgggatcctcttc agggaactgctgctgagggaactccccccgctgcaatgggggcggctgttccggtcgctg cgcatcatggagatgtccggggaggtgatgtcggggaacttcttcaacgggataccgggg ctgcagttcgtctcgcacgaagcctaccggaagctggaggcggggattgacgaggaacgg atttactggatcaacgccgccgatcccgtctcgctttgcggcagcgggttggagggggtg cgcgaggagcttcccccacgcctcccgtcgacccacctggtctaccacggcaccgggctc gcgctcatctcccggcgcttcggcaaggagctggagttcaaggtgccgccggaccacccg caactattcgactatctctcctttttcaaggtgctgttgagccgagacttcaacccccga aaaagcatcgcggtggagcggatcaacggggagccggcgggcgattcgaggtacgcggcg gcgctgctcgccttcggtttccagagggcgtacagcgggttggagctgtggcggagctac tag

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