Citrifermentans bremense: GEOBRER4_26080
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Entry
GEOBRER4_26080 CDS
T07006
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gbn02044
]
GEOBRER4_26080
02035 Bacterial motility proteins [BR:
gbn02035
]
GEOBRER4_26080
Secretion system [BR:
gbn02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GEOBRER4_26080
Bacterial motility proteins [BR:
gbn02035
]
Pilus system
Pilus assembly proteins
GEOBRER4_26080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_5
Big_12
PQQ_3
CopC
Motif
Other DBs
NCBI-ProteinID:
BCG47858
UniProt:
A0A6S6M2H0
LinkDB
All DBs
Position
complement(2999129..3004003)
Genome browser
AA seq
1624 aa
AA seq
DB search
MKRLLVVLFTLVTLAWSAGVAQADPTIVDTSPDNGAVNVDPITLNEIWVEFNDFTMDKNS
FTGSNAGRVSVDNGATYTVSKVDGDWPWNSGDFIKITLTKDLNYSTTYTVSIDSRVKNRD
GDQMGTKYVFSFTTKAKPSTDTTPPVIESTSPVSSAVDVPVTAAITATFSEVMDTATINS
TNFKINNGAVAGTVTLDASGKVATFTPSSNLGSFTTYTATVTTGVRDAAGNALASDYSWN
FRTMAVDNVRPTVTAVSPIAGATGVDPAAVVTATFSEAMSDTTITSANVTVSGGVTGTVS
YDPGTWTLSFAPSVPLANGTNYTVTISTGVTDLAGNAMASAKSWTFTTRAAATPPPLNDY
CQIPPYVTSTNNMVKPNVLLVVDNSGSMYEFAYKNPNTGNSSYDTSYNPAKSYYGYFDEK
KMYLYSGGAFVPDTSASTVTDTTQFLSGNFLNWLTMRRVDVVRKVLVGGKMTPRVGTGRY
LYPAADPDRDFYKSYNNVKYTIQSGASTEVIKDTTHNVTYNLKIAIGDEGSNQDEGLVPK
YSNLISFGIMFYNDGYKYENSINNVRDGGYVAADLGTTGSDLVTKIESTDPTTWTPLGET
LYEATRYFQAGASAYNGGTYSGKDPITYACQKNFVLILTDGESTKDQNIPGGSTNFSGKV
TDSSFNVKTWMDSIATQEGYASQYNSSANTDEGTYYLEGVAYWSHLTDMRSATLGKSDIP
GKQNLTIYTVFAFDDSAVGRDLLKKTAKYGGFNDYDSTGKPDKVAKWDQDGNGIPDTFYE
ASDGGLLAASLQKAFNDILARVSSGTAASILSNSEGSGANILQAVFHPRKYFDDQTSADW
IGEMHNMWYYVDPFIKNSSIREDSDYVPASPAPAHFLNLGTDKVINFYFNTDQAKTLVKR
YSDARGDGKPDLDTNADGVADSYTPVDEIDADSVKSIWKAGKQLWSRSSSRTIYTQLDGS
LTSFTGLDTTDTNIQRLLQAANKTEADKIVSYISGTDQSGFRSRTVNIGGVTGTWRLGDI
VSSTPRLQSSVKQNVYNMLPPRGYGDKSYGDDYTRKGYIYTSSYTSRGMVYVGANDGMLH
AFKLGLLDVSASGDRKAKLSGEGLGEEQWSFIPKNALPYLRYNADPAYNHIYYVDGNTTI
NDVTMGRPAGCTSNYWDCTRDVENGTNWRTVLISSMGLGGASKIAGSGCKGTTCVETPIT
DPANGSLGVGYSSYFALDITNPNSPSLLWEFGKPGLGFSTNGAALVKISARKADGVTPDL
TKNGKWFAVLASGPTGPIDTALHRFKATSDQKLTIYVLNLADGTVAATIDTLTDGTQLTN
AFAGTINNSVVDTDRWNRNAPGHYQDDALYMGYSQLSGTSWTGGVLRLMTGENPDPTTWK
LSKVIDGIGPVTTNVTRLQDRVNHNLWLYFGSGRYYYSQDDNDATRLVAALKEPCYDATK
DGLTPTCTTKKSLSNMTNQSTSFSTVTNDGWYINLAPVDTTHQFGAERMIADPTAIGNGV
VYYTTFAPTTDPCSFGGKSYMYALQYNSGDVPKCSQIGDAIALVQLSTGAFQEIHLKDAI
GCRDKNGTFVPPLTPQDPQVNPAGYTPPPGKSYSMVGKPPGDPSPIVTNANLKPVKRILH
ILEH
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttactggttgtccttttcaccctcgtcaccctcgcctggtcggcaggtgtt
gcccaggcagatcccacaatcgtcgacaccagccctgacaacggcgccgtcaacgtcgat
cctataaccctcaacgagatctgggtcgagttcaacgacttcaccatggataagaacagc
ttcaccggaagcaacgccgggagggtctccgtagacaacggggctacctacaccgtgagc
aaggtggacggcgactggccctggaactccggtgacttcatcaagatcacgctcaccaag
gacctcaattacagcaccacctacaccgtcagcatcgactcccgagtcaagaatagggac
ggcgatcagatggggaccaagtacgttttcagcttcaccaccaaggcgaagccaagcacg
gacaccacgccgccggttattgagtcgacctcgccggtaagcagcgccgtcgacgttccg
gtgaccgcggcgataacggcgaccttcagcgaggtgatggacaccgccaccatcaacagc
accaacttcaagatcaacaacggggcggttgccgggacagtaacccttgacgccagcggc
aaggtagccacctttaccccaagctccaacctgggctcgttcaccacctacacggccacg
gtcacgaccggcgtgcgcgacgcggcgggcaacgccctagccagcgactactcctggaac
ttccgcaccatggcggtcgacaacgtccgtcccacggttaccgccgtcagccccatcgcc
ggcgccacaggcgtcgaccccgcggccgtggtaacggccaccttcagcgaggcgatgagc
gacaccaccatcaccagtgccaacgtgacggtcagcggcggggtgacaggcacggtgagt
tacgatcccgggacctggaccctctcgttcgcgccgtcggtgccccttgccaacgggacg
aactacaccgtgaccatctccaccggagtcaccgacctcgccggcaatgcaatggcctct
gctaagagctggaccttcaccaccagggcagccgccacgccgccgccgctaaacgactat
tgccagatccccccatacgtcaccagcacgaacaacatggtgaagccaaacgtgctgctc
gtagtcgacaactcggggagcatgtacgagttcgcctataaaaatccgaacaccggcaac
agctcgtacgacaccagctacaaccccgcgaagagctactacggttacttcgacgagaag
aagatgtacctgtactcgggaggggcattcgttcccgacacctctgcctcgacggtcacc
gacaccacgcagtttttatcaggcaacttcctgaactggctcactatgcggcgcgtggac
gtggtccgaaaggtactggtcggcggtaagatgaccccgcgcgttggcaccggccgctac
ctgtatcctgccgcggatcccgaccgcgacttctacaagagctacaacaacgtgaagtac
actatccagtcgggcgcctccaccgaagtgatcaaggacaccacccataacgtgacctac
aacctgaagatcgccatcggggacgagggtagcaaccaggatgaagggctggtgcctaaa
tactccaacctgatcagcttcgggatcatgttctacaacgacggctacaagtacgaaaac
tcgatcaacaacgtacgcgacggcggctacgtcgccgccgatctcggcacgaccggcagc
gacctggtcaccaagatcgagagcaccgatcccaccacctggaccccgctgggcgagacc
ctctacgaggcgaccaggtacttccaggccggggccagcgcctacaacggcgggacctac
tccggcaaggatcccataacctacgcctgccagaagaacttcgtcctgatcctcaccgac
ggggagtcgaccaaggaccagaacatcccgggggggtcgaccaacttctcagggaaagtg
accgacagcagcttcaacgtgaagacctggatggacagcatcgcaacccaggaggggtat
gccagccagtacaactccagtgccaacaccgacgaagggacctactacctcgaaggggtt
gcttactggtcgcacctgacggacatgcgctcggcaaccctcggcaagagcgatatcccc
gggaagcagaacctcaccatctatacggtcttcgccttcgacgactctgccgttggccgg
gaccttctgaagaagacggccaagtacggcggcttcaacgactacgattcgaccgggaag
ccggacaaggtcgccaagtgggaccaggacggcaacgggatccctgataccttctacgag
gcctccgacggtggacttctcgccgcgtcgctgcagaaggcgttcaacgacatccttgcg
cgcgtctcctcgggtactgccgcctccatcctcagcaacagcgaggggagcggggccaac
atcctgcaggccgtgttccaccccaggaagtacttcgacgaccagacctccgccgactgg
atcggcgagatgcacaacatgtggtactacgtcgaccccttcatcaagaactcctccatc
cgcgaggacagcgactacgtgccggcgagcccggccccagctcacttcctgaacctcggc
acggacaaggtgatcaacttctacttcaacaccgaccaggcgaagacgctggtcaagcgc
tactccgacgccaggggggacggcaagcctgatctggacaccaacgctgatggcgttgcc
gattcctacacccctgtggacgagatcgacgccgacagcgtcaagagcatctggaaggcc
ggcaagcagctctggagccgctcctcttcgaggacaatctacacccagctcgacgggagc
ctcaccagcttcaccggcctggataccacggacacgaacatccagcgactgctgcaggcg
gcgaacaagaccgaggcggacaagatagtctcctacatctcgggcaccgaccaaagcggc
ttccgcagccggaccgtcaacattggcggcgtcaccggcacctggcgcctgggggacatc
gtctcctcgaccccgaggctgcagtcgtcggtgaagcaaaacgtctacaacatgcttccg
ccgagagggtacggcgacaagtcttacggggacgactacacgaggaaggggtacatctac
acctcctcctacaccagccgcggcatggtgtacgtgggggcgaacgacgggatgctgcat
gccttcaagctggggcttctggacgtcagcgcttccggcgaccgcaaagcgaagctttcc
ggcgaggggctgggcgaggagcagtggtccttcatcccgaagaacgcgctcccttacctc
aggtacaacgcggaccccgcttacaaccacatttactacgtcgacggcaacaccacgatc
aacgacgtcaccatggggagaccggcaggctgcaccagcaactactgggactgcaccagg
gacgtagagaacgggaccaactggcgcaccgtcctcatctccagcatggggcttggaggc
gcgtcgaagatcgcgggaagcgggtgcaaagggaccacctgcgtggaaaccccgatcacg
gacccggctaacggcagccttggggtcggctactcctcttacttcgccctcgacataacc
aatcccaacagcccttcgcttttgtgggagttcggcaagccgggcctcggcttctccacc
aacggtgctgcgctggtgaagatcagcgccaggaaagctgacggggtgaccccggatctg
accaagaacggcaagtggtttgccgtccttgcttccggaccgaccggaccgatcgacacc
gcgctgcaccggttcaaggcgactagcgaccagaagctgaccatctacgtgcttaacctg
gccgacgggaccgtagccgccaccatcgatacgctaaccgacgggacgcagctcactaac
gcctttgccgggaccatcaacaactccgtggtcgacaccgaccggtggaacaggaacgca
cccggtcactaccaggacgacgcgctctacatgggctacagccagctctccggcacctcc
tggaccggcggggtgctgcgcctgatgaccggagagaaccccgaccccactacctggaag
ctcagcaaggtgatcgacggcatcgggcccgtgaccaccaacgtgaccaggctgcaggac
cgcgtgaaccataacctctggctctacttcggctcggggaggtactactacagccaggac
gacaacgacgccaccaggctggtcgcagccctcaaggagccttgctacgacgccaccaag
gacgggctcaccccgacctgcaccaccaagaagagcctgtccaacatgaccaaccagtcc
acctccttcagcacggtgaccaacgacgggtggtacatcaacctcgcgccggtcgacacc
acgcaccagttcggcgcggagaggatgatcgccgacccgaccgcgatagggaacggggtg
gtttactacaccaccttcgctcctaccaccgacccctgcagctttggagggaagtcgtac
atgtacgccttgcagtacaactcgggcgacgttcccaaatgcagccagataggggatgcc
atagcactggtgcagctctccactggcgccttccaggagatacacctgaaggatgccatc
ggctgccgcgacaaaaacggcacgttcgtcccgccgctcaccccgcaggacccgcaggtg
aacccggcggggtacacaccaccgccgggaaaaagctactccatggtaggaaagccaccg
ggtgacccctcaccgatcgtgaccaacgcgaacctgaagccggtgaaacggatcttgcac
atcctggagcactga
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