Citrifermentans bremense: GEOBRER4_26860
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Entry
GEOBRER4_26860 CDS
T07006
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_26860
Enzymes [BR:
gbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEOBRER4_26860
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GEOBRER4_26860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BCG47936
UniProt:
A0A6S6M7W0
LinkDB
All DBs
Position
complement(3110715..3112748)
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AA seq
677 aa
AA seq
DB search
MAVGMAQQALSGDPALEPSDLGFLVPDERCYLDALDLLCRRAGLPLSGLPVEKPVRDLGK
EAVFSFLATRRQPPPALALAALLSSPLMPWSRETGNDLAQEAVGEGAPDLRAPQGMAEKG
KRMLRLLAKRIDDAAALAKALLRFAALLRGVEGMEVHVARALATIKRCRAELTEEGAVPW
GDLMRIAAPETVTGPAAGVLVREGAAVFLDYELPWRQVRHLFVLGFVDGRYPREPSVSSV
FSDADLEALAAAGYAVEPPSAGAMRRRSELREQIGCASQRLNLFMPRRDPFGKPLRPSQT
LTYLAKVFGADEPDELVLELDREEERMKVASLPTAPPSNPLPQRELKKDDLFLKRDLLAI
HCYEDGSPKPQSPSSLDTLMVSPLAWLLSRAGLQPREWSPESLDVASKGTLAHHVFEHLF
RPGQPLPSPAEVKARVPILLDQAIERKKPLLLEPEWHVERRHLAKEVEVAALHWRGLLEQ
IGAEVLGNEVWLKGVLDTLPIHGSADLLLRLPGGQLYVVDYKKAGSGQRRERMKKGYDSQ
ASLYRLMIQTGGSKSAEGALKEALEQAGEIGVVYYLMNDQTALADSSGWIDGKVAGMEEL
GSGISVNAIELIRERIAELRLGKVTLNHEGDPDWFKSNAGITMYAVDDTPLIPLFMKDDP
GDEGEDTNDQVRQRGNN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtggggatggcccagcaggcgctgtccggtgaccccgcacttgaaccgtccgac
ctcggtttcctggtcccggacgagcggtgctatcttgacgctcttgatctcctgtgtcgc
cgcgcgggactgccgctgtccggccttcccgtggagaagccggtgcgcgacttggggaag
gaggcggtattctcgtttcttgctacccgccgacaaccgccccccgcgctggccctggcc
gcgcttctttcttctccgctcatgccctggagccgggagaccggtaacgatctcgctcag
gaggcagtgggcgagggtgcacctgatctgcgggcgcctcagggcatggcggaaaaaggg
aagcggatgctgcgccttctggccaagcgtatcgatgatgcggccgctttggccaaagcg
ctgctgcgattcgctgcgctcctgcgtggtgttgaggggatggaagtgcatgtggcgcgc
gccctagcgacgataaaacggtgccgggcggagctcacggaggaaggggcggtgccttgg
ggggacctcatgcggatcgccgcgccggaaacggtgactggtcccgcggccggggtcctg
gtgcgggagggagcagcggtctttcttgactacgaactcccatggcgccaagtgcgacac
ctcttcgtgctcggtttcgttgacggccgctatccgcgggagccctcggtgtcgtccgtc
ttttccgacgcagatctcgaagctcttgcggcagctggctacgccgtcgagccccccagc
gcaggggcaatgcggcgccgttccgaactgcgtgagcagatcgggtgcgcgtcgcagcga
ctcaacctgttcatgccccgccgtgatccctttgggaaaccgctgcgcccctcccagacc
ctcacctacctcgccaaggtcttcggagcggacgagcccgacgaactggtactggaactg
gaccgggaagaggaacgaatgaaggtggcttctctgccgaccgccccgccgtctaatccg
ctgcctcagcgcgaactgaaaaaggacgacctcttcctcaagcgggatctcttggcaatc
cattgttacgaggacggctcgcctaagccgcaatcccctagcagtctcgacaccctcatg
gtctcgcccttggcatggctccttagccgagccggcctacagccgcgggagtggagcccg
gagtcgctggatgtcgcttccaagggaaccctcgcccaccacgtcttcgaacacctcttc
aggcccggccagccgcttccgagccccgcggaggtgaaagcgcgggtgcccatcctgctc
gaccaggcgatcgaacggaagaagccgcttctcttggagccggagtggcacgtggaacgt
cgtcatctcgcaaaggaggtcgaggtggcggcactgcactggagagggctgttagagcag
atcggggcggaggtcctggggaatgaagtctggctcaagggggtgctcgacaccctgccc
atccacggcagtgccgatctgttgctaaggctcccgggagggcaactctacgtagtcgat
tacaagaaggccgggagcggacagcggcgcgagcgcatgaaaaaggggtacgacagtcag
gcatccctgtatcgtctcatgatccagaccggcggcagcaagtctgctgagggtgccctc
aaggaggcgctggagcaagctggcgagattggggtggtgtactacctgatgaatgatcag
accgcccttgccgacagcagtggctggatcgacgggaaagtggcgggaatggaggagctg
ggctccggaatctccgttaacgccatagagctgatcagggagaggatcgccgaactgcgc
ctggggaaggtgactctaaatcacgagggcgatccggactggttcaagtccaacgccggc
atcaccatgtacgccgtggacgacactccgctcataccactattcatgaaggacgacccc
ggcgacgaaggtgaggataccaacgaccaagtccggcaaagggggaacaactga
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