Citrifermentans bremense: GEOBRER4_27490
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Entry
GEOBRER4_27490 CDS
T07006
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbn02000
]
GEOBRER4_27490
Transporters [BR:
gbn02000
]
Other transporters
Pores ion channels [TC:
1
]
GEOBRER4_27490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
OprF
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
BCG47999
UniProt:
A0A6S6M3N2
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All DBs
Position
complement(3184329..3185735)
Genome browser
AA seq
468 aa
AA seq
DB search
MKKITSCICMMVLAVMALASTAQAGERAGAFSISPFVGGYVFDDNDQAWFRQNRPLGGLR
LGYDFTDHFAAELVGTYMKGEYKATEHNVGVYSYRLDLLYNILADSPIVPYLAFGGGGTT
IRQRGPNSHDGTVDAGGGVKFFMTDDFALRADARHIVDFQSNHLSRDHARNWEYSLGLSW
LFGGRERAAAPAKAAAAPAEQPAAVTPAPAPEPPLEVPAAEPMPGHYKYCITLQGEFDID
KAVIRPEYKDEIAQVGNFMKKYPTTTAVIEGHTDNVGSYNHNMDLSQRRAEAVVNYLVEQ
YGIERSRLSAKGYGFTRPIADNATDEGKQKNRRIEAVIDCAFDVQQVTPPERLCMSLVLD
FDPGKAEVKPQYRNEIAKVADYMKRYNTTTAVIEGHTDNTGSPDQNMKLSQQRAQNVVNY
LVDNFGIERSRLSAKGYGATRRISYNNTPEGRQKNRRINAVIDCVVTK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattaccagctgtatctgcatgatggtcctggccgtgatggcgctggccagc
accgcgcaggccggggaaagggcgggggcattttccatatccccctttgtcggcggctac
gtcttcgatgacaacgaccaggcctggttccggcagaatcgccccctgggcggcttgcgg
ttgggttatgacttcaccgatcatttcgcggcggagttggtgggtacttacatgaaaggg
gaatacaaggcgacggagcacaacgtcggcgtctactcctaccgtctcgacctcctctac
aacatcctggccgactctcccatcgtcccctaccttgctttcggcggcggcggaaccacc
atcaggcaaaggggccccaactcccatgacggcaccgtcgacgcggggggcggcgtgaag
ttcttcatgactgacgatttcgccctgagggcggatgcccgtcatatcgtcgactttcaa
agcaaccacctaagccgcgaccatgcccgtaactgggaatattctctcggtcttagctgg
ctcttcggcggcagggaacgcgctgcggctcccgccaaggccgctgccgctccggccgag
caaccggctgcggtcactcccgcccctgcccccgagcccccgctcgaggtaccggcagcc
gagccgatgccgggccactacaagtactgcatcaccctgcagggtgagttcgacatcgac
aaggcggttatccgtcccgagtataaggacgagatcgcccaggtcggcaacttcatgaag
aagtacccgaccaccaccgccgtcatcgaagggcacaccgacaacgtcggctcctacaac
cacaacatggacctctcccagcgccgcgccgaagcggtggtgaactacctggtcgagcag
tacgggatcgagcgctcccgcctctccgccaaagggtacggtttcacccgcccgatcgct
gacaacgcgaccgatgaggggaaacagaaaaaccgtcgcatcgaggcagtcatcgactgc
gccttcgacgtgcagcaggtgactcctccggaaaggctctgcatgtcgctcgtgctcgat
ttcgaccccggcaaggccgaggtgaagccgcagtaccgcaatgagatcgccaaagtggcc
gattacatgaaacgctacaacaccaccaccgccgtgatcgaggggcataccgacaacacc
gggtccccggaccagaacatgaagctttcgcagcagcgcgcccagaacgtggtcaactac
ctggtggacaacttcggcatcgagcgcagccggctttccgccaaggggtacggcgcgacc
cgccgcatcagctacaacaacacgcctgaaggtcgccagaaaaaccgcaggatcaacgcc
gtcatcgactgcgtcgtcacgaagtag
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