Citrifermentans bremense: GEOBRER4_27560
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Entry
GEOBRER4_27560 CDS
T07006
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
gbn
Citrifermentans bremense
Pathway
gbn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEOBRER4_27560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5122
MBG_2
Glucodextran_B
Rax2
Big_13
Cadherin-like
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
BCG48006
UniProt:
A0A6S6M841
LinkDB
All DBs
Position
complement(3192681..3197963)
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AA seq
1760 aa
AA seq
DB search
MKPRPLLILLLLLFISLCPGRAQAAVSSLRDGFDIYSSVKISGAGIRSIAVQPWDGKVII
GGSFTLTGGTPETTRVNLARLNTDGTLDPSLNHNPQGSVNAIAIQWNQADAAQSSIVIGG
AFQKIATPEGDVDRNAMARIRSGDGTLESFDPLTSPAAVVNALVLPPGSSDIIVGGSFSE
VSHTSPCGNIATISLDDGSLKSGFSGGVSGGEVFTIALQNGKLVAGGSFTGYLARFTSTG
LPDPGFYAYPNGAVRALAVQVDGRLVIGGEFTGIAIGAAKIFHPREHLARTSDNGTIDDL
DPAPDGSVAAVALQPDGKIVIGGEFTKIAKPELAGGVFTPALPAPARNHAARLNMDGSLD
PGFDPNADLKVHAALVQLDGKILIAGDFHNAAGRPRTKLARFYPEGGLDDDAIAIGTTIV
SLFGTEDLGADILTFYAHQDGSIDIGGLFSNIGDELRARFARLKTDWSLDSSPPGDLNLG
NGVLVIAPYLNGDLLVTGQFGDIDGVLQRSVLRLKSDGSLDADFNSRINLLTEGGGRPGL
WVTRAVGMMPTGNTLPDQTPEMVHFIAGGSSDPEWDWENEIELIPRFFLAKLNHAGDLDA
TFAANVYALPLSLIGGQITALMVQGDKILVGTTQGVVLRLNADGTKDDSFTELQLGYGMV
NTIQQTAGGKLMIAGTFTSTYTSDDGKSWNRHIIRVDDSGVIDDTFNVETIYETPDGWGI
DGSFYAIAVQTDGNMLVSGTFNRIKDGKETTATRWHIARLSPEGVLDPDFDYGFLKGTSD
EYNLNMVNAVGKQLDGKLVLAGAFRSLDGDPQKRLLERFSDGWAPQEVVVQPDGKAVRWE
RRGAGPEFARVTFEHSTNGVTWESLGPVERVPGTANWELTGNGLDLTASGTLTNRFLRAR
GYITNHRGGAGPMVETIRVFYLTPTAAKQPQTIDPGDITDKTYGDLDFFPGGYATSGLPV
TYASSDPAVAVAAGDEIRIVGAGTATITVSQEGDDNYEPAEDVKVSFTVAKAPLRVIADD
QYRAYLTPNPALTASHKGFVKGEGTSVLSGSPSLSTGATLDSGVGTYPIVVAVNTLSARN
YRFVPVDGSLHVSKSGQSIIFSPIAERTYGDPDFSLGWSSTSGLPLTYASSAPEVAVVVG
NQIRIVGAGTTTISAWQVGDGNYDPAAAVSVPFTVARAPLKVIADDQARAYLTPNPALTA
SYDGFVKGEGTSVLSGSPSLSTAATLDSGIGEYPIAATAGTLSAHNYRFLPVNGTLRIFK
SCQEIYFPAIPERTFGDPPFEIVASACSGLALTLVSSNPEVAQVNGQVITITGAGSAVIT
ASQLGTGDLEGAPERSQTLVVHKSGQGVVFSSLAQKVVGDPPFTLAATATSGLPVSYASS
DPSVAAVSGNLVTIVGAGTCVITALQSGDNDFEAALPVSQSLMVASEGEPPALSLSTLSG
GAVTANPVLNLMGQASDPSGIASLTVNGEDLTAEAASFSSALPLAVGANTVTLSALDGAG
NRTTRTLSITLDPLAPELSVPIPPDNSVTDLPTCTLKGSVTPGSTVTLWVNGSSSQLLAV
QEGSFTGSAYLVEGVNTIELAAELSGRSSRVKRSVTLAPGGAALAITEPAQDLRTELQSL
TIRGSTNLQQPGSVRLEVDGAQFIPEISGGSFEQQVTLAHTGEIRIRARTAGGSGEQVLA
QRNLIRFERIPGDLDGNGSIDIQDASLLLRVSLGLIPVDFELLAHGDLAPLVNGRPQPDG
VIDVGDILVLLRRIVGLADF
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaggccgcttttgatcctgctgcttttactctttatctcgctttgccccggt
cgcgcccaggccgccgtctcgtcgttgcgcgacggcttcgacatttacagcagcgtcaag
ataagcggcgccgggatccggtcgatcgcggtgcagccctgggacggcaaggtgatcatc
ggcggctccttcaccctgaccggcggcactcccgagaccaccagggtgaacctggcccgg
ttgaacaccgacggcactcttgacccatccctcaatcacaacccgcaggggagcgtgaac
gccatcgccatccagtggaaccaggccgatgccgcccagagctccatcgtgatcggggga
gcgttccagaagatcgcgacaccggagggggacgtggatcgcaacgccatggcccgcatc
agaagcggcgacggtactctggagagcttcgacccgctcacctcgcccgcggcagtggtg
aacgcgctggtcctgccccccggctccagcgacatcatcgtgggcgggagcttcagcgag
gtctcccatacctccccctgcggcaacatcgccactatctcgctcgacgacgggagtctc
aaatccggcttttcgggcggggtgagcggcggcgaagttttcaccatcgccctgcaaaac
gggaagctggtcgcgggtggaagtttcaccgggtatctggcccgtttcaccagtaccggt
ctgccggatcccggcttctacgcctatccaaacggggcggtccgggcgctggcggtgcag
gtggacggccggctggtgatagggggggagttcaccggcatcgcgatcggcgctgcgaag
atattccacccccgcgagcacctggcgcgcaccagcgacaacgggaccatagacgacctc
gaccccgctcccgacggcagcgtcgccgccgtcgcgctgcagcccgacggcaagatcgtc
atcgggggggaattcaccaagatcgcgaaaccggagttggccggcggcgtgttcaccccg
gcccttcctgctcccgcccgcaaccacgcggcccggctcaatatggacggctccctggat
cccggcttcgacccgaacgcggacctcaaggtgcatgcggccctggtgcagttggatggc
aagatcctcatcgccggcgacttccacaacgccgccggcaggccccgcacgaaactggcg
cgcttctacccggaggggggcctggacgacgacgccatcgcgatcggcaccacgatagtc
tcgctcttcggaacggaggatttaggcgccgatattctcaccttctacgcccaccaggac
ggcagcatcgacatcggcgggctcttcagcaacataggggacgagttgagggcacgcttt
gccaggctgaaaacggactggagcctcgatagctccccgccgggggacctcaacctgggt
aacggcgtgctggtgatagctccctatctaaacggagacctcctcgtcaccggacagttc
ggcgacatagacggggtgctgcaaagatcggtgctccgccttaaatccgatggctctcta
gatgccgatttcaactcgaggataaacctgctgaccgaggggggcgggagacccggtctg
tgggtgacccgtgcagtcgggatgatgccgacggggaacacgctcccggaccaaacgccg
gagatggtccatttcatcgccggcggcagctccgatcccgagtgggactgggagaacgag
atcgagctgatcccccgttttttcctggcgaagctgaaccatgcaggcgatctggacgcc
acctttgcggccaacgtctacgccttgccgctttccctgatcggcgggcagatcaccgct
ctcatggtgcagggggataagatcctggtgggaaccacccagggggtggtgctgcgcctg
aacgccgacgggaccaaagacgactccttcaccgagctgcagcttggttatggcatggtc
aacaccattcagcagacggccggcggcaaactgatgatagccggaaccttcacctccacc
tataccagcgacgacgggaagagctggaacaggcacattatccgggtcgatgacagcggc
gtcatagacgacaccttcaacgtcgagactatctacgaaacgcccgacggatgggggata
gacggttccttctatgcgatcgccgtgcagaccgacggcaacatgttggtatccgggacg
ttcaacaggatcaaagacggcaaggaaaccacggctacgagatggcacatcgcccggctt
agcccggagggggtgctcgaccccgacttcgactacggtttcctcaaaggcaccagcgac
gagtacaacctcaacatggtgaacgcggtcggcaagcagctggacgggaaactggtgctg
gcgggcgccttccgcagcttggacggcgatccccagaaacggttgttggagcgattcagc
gacggatgggcgccgcaggaggtggtggtgcagcctgacggaaaggcggtgcggtgggag
cggcgcggtgcggggccggagttcgcccgcgtcaccttcgagcattctacgaacggggtg
acctgggagagcctggggccggtagagagggtcccggggacggcgaactgggaactcacc
ggcaacggcctcgacctgacagcttccggcacgcttaccaaccgcttcctgcgtgccagg
gggtacataacgaaccacaggggcggggccggccccatggtcgagactatccgcgtcttc
tacctgaccccgactgcggccaagcagccacagaccatcgatccgggtgacatcaccgac
aagacctacggcgacctggacttcttccccggcggatacgccaccagcgggctgccggtc
acctatgccagttccgatcccgctgtcgccgtcgcggcgggagacgagatccggatcgtc
ggcgcagggaccgccaccattaccgtctcgcaggagggggacgacaactacgaaccggcg
gaagacgtgaaggtctccttcaccgtagcgaaggcgccgctcagggtgatagccgacgac
cagtatcgcgcctacctgaccccgaacccggcgctcaccgcgagccataaggggttcgtc
aagggggaggggacttccgtcctgtcgggtagcccctcgctctcaaccggcgccaccctc
gatagcggcgtcgggacctaccctatcgtcgtagcggtcaacaccctctccgcccgcaac
taccgcttcgtgccggtcgacggcagcctgcacgtgtccaagtccggccaatcgatcatc
ttctccccgattgcggaacgtacctacggcgacccggacttcagcctcggttggagttcc
acgagcggtctgccgctgacctatgccagttcagccccggaggtcgccgtcgtcgtgggg
aaccagatccgcattgtcggtgccgggaccaccaccatcagcgcctggcaggtgggggac
ggcaactacgatccagcggcagccgtcagcgtccccttcaccgttgccagggcccctctc
aaggtcatagccgacgatcaggcccgggcttacctgactccgaacccagcgctcaccgcc
agctacgacgggttcgtcaagggggaggggacctccgtcctgtcggggagtccctcgctc
tccaccgccgccaccctcgatagcggcatcggggagtaccccatcgcggcaaccgccggc
acgctgtcggcgcacaactaccgcttcctcccggtcaacgggacactgcggatcttcaaa
tcctgccaggagatctacttccctgccattccggaacggaccttcggcgacccgcccttc
gagatcgtcgcctccgcgtgcagcgggctcgccttgaccctcgtgagttcgaaccccgag
gtggcgcaggtgaacgggcaggtgatcactataaccggtgccgggagcgcggtgatcacg
gcgtcgcagctgggaacgggggacctcgagggggcgccggagagatcgcagacccttgta
gtgcacaagagcgggcagggggtggtcttttcctcgctggcccagaaggtggtcggggat
cctcccttcaccctggcggcaaccgccaccagcggcctgcccgtgagctatgcgagctct
gacccaagcgtagccgccgtttcggggaacctggtcaccatcgtcggtgccggtacctgc
gtcatcaccgccctgcagagcggcgacaacgacttcgaggccgctttaccggtctcacag
tcgctcatggtggccagcgagggtgagccgccggcgctctccctgtcgacgctttccggt
ggcgccgtcaccgcgaacccggtgctcaacctcatgggacaagcaagcgatccctccggc
atcgcctccctcacggtgaacggggaggacctgaccgccgaggcagcgtctttcagctcc
gcgctccctctcgctgtcggggcgaacacggtaactctctccgccctcgacggggcaggt
aatcggaccacccggacccttagcataacccttgatcccctggcgccggagctctcggtg
ccaatacctccggacaacagtgtcaccgatctccccacctgcaccctgaaggggagcgtc
acaccggggagcactgtcaccctctgggtgaacggctcctcctcgcagctccttgccgtg
caagaagggagcttcaccggcagcgcctacctcgtcgagggagtcaacaccatcgagctc
gcggcggagctctccgggcggagctcccgggtgaagcggagcgtcacccttgcgccagga
ggagccgccctcgcgatcacggagccggcacaggacctgcgcactgagctgcagtcgctc
accatccgcggctccaccaatctgcagcagcctggaagcgtcaggctcgaggtggatggc
gcacagttcatccccgagatctcgggcggcagctttgagcagcaggttacgcttgcgcat
accggcgagatccgcatcagagcgaggactgcaggcggctctggagagcaggtcctggcg
cagaggaacctgatccggtttgagcgcataccgggcgacctggacggcaacggcagcatc
gacatccaggacgcctccctgctgctcagggtgtcgctcgggctcataccggtcgacttc
gagctgctcgcgcatggcgacctggccccgctggtgaacggccggccgcagcccgatggc
gtcatcgacgtcggcgacatcctggtgctgctgcgcaggatagtcggtctggccgacttc
tag
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