Citrifermentans bremense: GEOBRER4_27580
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Entry
GEOBRER4_27580 CDS
T07006
Name
(GenBank) Hup-type Ni,Fe-hydrogenase small subunit
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn01120
Microbial metabolism in diverse environments
gbn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
GEOBRER4_27580
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GEOBRER4_27580
Enzymes [BR:
gbn01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
GEOBRER4_27580
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Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
Motif
Other DBs
NCBI-ProteinID:
BCG48008
UniProt:
A0A6S6M2V6
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Position
3202753..3203943
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AA seq
396 aa
AA seq
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MKDLQQWRDGDSFGDLLKRRGVTRREFLTFCGKMAALIGVGGVFGGSKTAFAQELAGRLE
AARRPSVVYLQLQECTGCVESLLRSASTPVEELVLEQISLDYNELLMAPSGEAAEQALAS
AQTKPHLLLVNGSVPLKDGGVYCTIGGRSARDVLERAAANATAVVAIGACAEYGCVQAAS
PNPTGAVGVADVIRDRPVVNISGCPPIAETISATLTYFLAYGHTPPLDGLGRPLFAYGQR
IHDKCPRRASFDAGQFAERFDDQNARLGHCLYKLGCKGPATFAPCATIEWNDGVSFPIKA
GHPCLGCTERHFYDRMTPFYRRLPGITVPGLGVEATANTIGVAAVAASVAAVAVHSAATV
IAKHRARRAEPESLPLAVLGDREEPGVKQKEKEKDS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcttcagcagtggcgcgacggcgacagtttcggagatttgctgaaacggcgg
ggggtgacacggcgagaatttctcaccttctgcggcaagatggcggcgctcatcggcgtc
ggcggggtcttcgggggaagcaagaccgcatttgcgcaggagctcgcggggaggcttgag
gcggcacggcgcccgagcgtggtctacctgcagttgcaggagtgcaccggctgcgtcgag
agcctgctccgctcggcgagcaccccggtcgaggaactggtcctggaacagatctcgctc
gactacaacgagctcctgatggctccctcgggagaggcggccgaacaggcgctcgcctca
gcgcagacaaagccgcacctcctcttggtgaacggctcggtgccgcttaaagacggtggc
gtctactgcaccatcggcggccgctccgcgcgcgacgtattggagcgtgccgcggccaac
gccacagcggtcgtcgccatcggtgcctgcgccgagtacggctgcgtccaggcagcctcc
cccaaccccaccggcgcggtgggagtagcggacgtgatcagggaccgccccgtggtgaac
atcagcggctgtccccccatcgccgagaccatcagcgccaccctcacctatttcctcgcc
tatggccacacccctccgctcgacgggctagggcgcccgcttttcgcatacggccagcgc
atccacgacaagtgcccgcggcgcgcaagcttcgacgcagggcagttcgccgagcgcttc
gacgaccagaacgcccgcctggggcactgcctctacaagctggggtgcaagggccccgcc
accttcgccccctgcgccaccatcgaatggaacgatggggtgagtttccccatcaaggcc
ggacacccctgccttggctgcaccgagcgccacttctacgaccgcatgaccccgttctac
cggcgcctccccggcattaccgtcccggggctcggcgtggaggccaccgccaacaccatc
ggcgttgcggccgtcgcagcctcggtcgccgcggtcgcggtccactccgcggcaaccgtg
atagccaagcaccgggcccgccgggccgaacccgaaagcctgccgctggcggtactgggg
gaccgggaagaaccaggcgttaagcagaaggaaaaggagaaggattcctaa
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