Citrifermentans bremense: GEOBRER4_28200
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Entry
GEOBRER4_28200 CDS
T07006
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gbn
Citrifermentans bremense
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbn03016
]
GEOBRER4_28200 (truB)
Enzymes [BR:
gbn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GEOBRER4_28200 (truB)
Transfer RNA biogenesis [BR:
gbn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GEOBRER4_28200 (truB)
Prokaryotic type
GEOBRER4_28200 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCG48070
UniProt:
A0A6S6M376
LinkDB
All DBs
Position
complement(3268192..3269079)
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AA seq
295 aa
AA seq
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MLNGFLVIDKPAGVTSHDIVSKVRRAINQKKVGHTGTLDPFATGVLPVAVGEGTKAIQFL
DESEKEYRAVLRLGIATDTQDLTGQVLSERDWSHLEASDLERLAPQFLGLQKQMPPMFSA
IKKDGVPLYKLARKGIEVEREAREVEIHALCFEWIRLPEACFTVTCSRGTYVRTLASDIG
EALGCGAHLLELRRTRSGLFREADAISIEALAEAVNQEDLILPLDRALDHLQRLELTEAG
GRKVQNGVVPQAADFTTATGEFRQGEQVRLYQGERFAAVAEYDMLKGLRLARVFN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacggctttttagtgatcgacaagccggccggtgtcacctcgcatgacatcgtg
tcgaaggtgcgtcgcgccatcaatcagaaaaaagtggggcatacgggaaccctcgacccc
ttcgccacgggcgtactgccggtggccgttggcgaggggacgaaggcgatccagttcttg
gacgagtcggagaaggagtaccgggccgtattgaggctggggatcgccaccgacacccag
gacctgaccgggcaggtgctctccgagcgcgactggtcgcacctggaggcgtcggacctg
gaacggctcgcgccgcaatttctcgggctccagaagcagatgcctcccatgttctccgcc
atcaaaaaggatggcgtcccgctctacaagctggcgcgcaaggggatcgaggtggagcgc
gaggcgcgcgaggtggaaatccacgcgctctgcttcgagtggatccgcctccccgaggcc
tgcttcaccgttacctgctcgcgcggcacctacgtcaggacccttgccagcgacatcggc
gaggcgcttgggtgcggtgcgcacctcctcgaactgcggcgcacgagaagcggccttttc
cgcgaggccgacgccatcagcatcgaggcgctggccgaggcggtgaaccaggaggacctg
atcctcccgctggaccgggctctcgaccacctgcaacggctggagctcaccgaggcgggg
gggaggaaggtgcaaaacggcgtggtgccgcaagctgcggatttcaccaccgcaaccgga
gagttcaggcagggcgagcaggtgcgactctatcagggggaacgttttgctgcagtagcc
gagtacgacatgctcaaagggctccgattggcgcgcgtatttaactag
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