Citrifermentans bremense: GEOBRER4_28700
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Entry
GEOBRER4_28700 CDS
T07006
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GEOBRER4_28700 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_28700 (xseA)
Enzymes [BR:
gbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GEOBRER4_28700 (xseA)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GEOBRER4_28700 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Mis14
Motif
Other DBs
NCBI-ProteinID:
BCG48120
UniProt:
A0A6S6M3B7
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All DBs
Position
complement(3324375..3325751)
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AA seq
458 aa
AA seq
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MQLFKERRVLTVSALTALVRGLLEENFEQVWVEGEISNLACPQSGHCYFTLKDAGAQIRC
VMFRGAFRSLKFTPRDGMRILTRGRITLFEPRGEYQLVADYLEPQGIGGLQMAFIQLKEK
LAKEGLFSELHKREIPKLPRRIGVVTSPTGAAIRDILTVLNRRFTNVELLISPVRVQGEG
AAREIAGAIDDLNRVGNIDVMIVGRGGGSLEDLWAFNEEVVARAIHRSKIPVISAVGHET
DFTIADFVADLRAATPSAAAELVVASKKELTAEVEALTHRLHVSQQRRLERSRALVTALS
RAVTDPSRVLGHLAQRVDSLDARLVREAGLILDDASERIVTLTARLSRQTPALTLQRSSE
RLSNLSLRLDHAIARRLACAAESVGLATGTLNAVSPLATLSRGYSITRKLPARSVVTSSR
QLAPGDRVELSFAAGSALCTVEQSHGESESLTAPPRSV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcttttcaaggagcggcgggtactcacagtgagcgcgctcacggcgctggtgcgc
gggcttttggaggagaacttcgagcaggtatgggtcgagggtgagatctccaacctcgcc
tgcccgcagtccgggcactgctacttcaccttgaaggatgccggcgcccagatccgctgc
gtcatgttccgcggcgccttccgctccctcaagttcacccccagagacggcatgcgcatc
ctaacccgcggcaggatcaccctcttcgagccgcgcggcgaataccagctcgtggccgac
tacctggagccgcaggggataggcgggctgcagatggccttcatccagctcaaggagaag
cttgccaaggaggggcttttctccgagctgcacaagagggagatcccgaagctgccgcgc
cgcatcggtgtggtcacctcccccaccggcgccgccatcagggacatcctcaccgtttta
aaccgccgcttcaccaacgtcgagctcctcatctcgccggtccgggtgcagggggagggg
gcggcgcgcgagatcgccggcgccatcgacgacctgaaccgggtggggaatatcgacgtc
atgatcgtcggccgcggcgggggctcgctggaggacctctgggccttcaacgaggaggtg
gtcgcccgcgccatccaccgctccaagatccccgtgatctcggcggtcgggcacgagacc
gacttcaccatcgcggatttcgtcgccgacctgagggccgccacgccgtcggccgcggcg
gagctcgtggtagccagcaagaaggagctgactgcggaggtggaggcactgacccacaga
ctccatgtctcgcagcagcgccgcctggagcgctcgcgcgccctggtgaccgcgttgagc
cgggccgtcaccgacccgagccgtgtgctcgggcacctggcgcagcgggtcgactcgctc
gacgcccggctggtgcgcgaggcggggctcatccttgacgacgcctccgagaggatagtg
acgctcaccgcgaggctgtcgcggcaaacccctgcgctcacgctgcagagaagctccgag
cggctttccaatctttcgctgcgcctggaccacgccatcgcccggcggcttgcctgcgcc
gcggagagcgtggggcttgccaccggcaccctgaacgccgtttcccccctggccaccctc
tcccgggggtacagcatcaccaggaaacttcccgcccgctcggtagtgaccagcagccgc
cagctggcccccggcgaccgggtggaattgagctttgccgcgggttccgcgctttgcacc
gtggagcagtcgcacggggagagtgagtccttgacggcacccccacgatcggtataa
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