Citrifermentans bremense: GEOBRER4_31790
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Entry
GEOBRER4_31790 CDS
T07006
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GEOBRER4_31790 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbn03021
]
GEOBRER4_31790 (rpoA)
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_31790 (rpoA)
Enzymes [BR:
gbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GEOBRER4_31790 (rpoA)
Transcription machinery [BR:
gbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GEOBRER4_31790 (rpoA)
DNA repair and recombination proteins [BR:
gbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GEOBRER4_31790 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Mis14
DUF7235
Motif
Other DBs
NCBI-ProteinID:
BCG48429
UniProt:
A0A6S6M506
LinkDB
All DBs
Position
complement(3674029..3675048)
Genome browser
AA seq
339 aa
AA seq
DB search
MYRNWRDLIRPKKLQVETESLTNTYGKFFAEPFERGFGTTLGTGLRRVLISSLQGAAIVS
VKAKGVLHEFSAVPGVTEDMTDIILNLKGVRLKVHGNESRMIRIVQKGEGVVKAKDIITD
NNVEILNPEHHIATCSKDANLEMDLMVKVGKGYVPADRNRDEKAPVGTIPIDAIFSPVHK
VNFTVTNARVGQITDYDKLTIEVWTDGSVKPQDAVAYASKILKDQLSIFINFDEDVEPQE
EAEPEEERERFNENLYRSVDELELSVRSANCLKNAGIKLIGELVSRSEAEMLKTQNFGRK
SLNEIKDILVDMGLTLGMKLENFPDPEIMRRLRGEQKEE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaactggcgcgatctgatcagacctaagaagctccaggttgagacggaatcg
ctcacaaatacatacgggaagttctttgccgagccttttgaaaggggcttcggcaccacc
ctgggaacaggtctgcgtcgggtcctcatctccagcctgcagggggcggccatcgtctcc
gtgaaggcgaagggcgtactgcacgagttctccgcagtcccgggcgtcaccgaggacatg
acggacatcatcctgaacctcaagggtgtgcgcctcaaggtgcacggcaacgagtccagg
atgatcaggatcgtccagaagggcgagggggtggtgaaggcgaaggatatcatcacggac
aacaacgtggagatcctgaaccccgagcaccacatcgcgacctgctccaaggacgcgaac
ctggagatggacctcatggtcaaggtcggcaaagggtacgtccccgctgaccgcaaccgc
gacgagaaggcgccggtagggaccatccccatcgacgcgatcttctccccggtccacaag
gtgaacttcactgtaaccaacgctcgcgtgggtcagatcactgactacgacaagctcacc
atcgaggtctggaccgacggcagcgtcaagccgcaggatgccgtggcctacgcttccaag
atcctcaaggaccagctttccatcttcatcaacttcgatgaggacgtagagccccaggag
gaggcggagccggaggaggagcgcgagcgtttcaacgaaaacctgtaccgctcggtagac
gagttggaactctcggttcgctccgcgaactgcctgaagaacgctgggatcaagctgatc
ggcgaactggtttccagaagcgaagccgagatgctgaagacccagaactttggcaggaaa
tctctgaacgaaatcaaggacatcctcgtcgacatgggcctcaccctcggcatgaaactg
gagaacttcccggatcccgagatcatgaggcgcctgcgcggcgagcagaaagaagaatag
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