Citrifermentans bremense: GEOBRER4_32950
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Entry
GEOBRER4_32950 CDS
T07006
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GEOBRER4_32950 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gbn01007
]
GEOBRER4_32950 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbn03016
]
GEOBRER4_32950 (lysS)
Enzymes [BR:
gbn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GEOBRER4_32950 (lysS)
Amino acid related enzymes [BR:
gbn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GEOBRER4_32950 (lysS)
Transfer RNA biogenesis [BR:
gbn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GEOBRER4_32950 (lysS)
Prokaryotic type
Other AARSs
GEOBRER4_32950 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCG48545
UniProt:
A0A6S6MAQ3
LinkDB
All DBs
Position
complement(3788333..3789811)
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AA seq
492 aa
AA seq
DB search
MEELSELLLQRRRKVDALWEAGINPYPNDYRPQHTSADLRAAYGDKEVIEEQPQSFVVAG
RILMRRSFGKAAFVQVQDRKGRMQLYVKKDTVGEELFAEFENYDIGDIIGATGTPFRTKT
GELSLAVSELRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQL
IRDFMTRNDFLEVETPMMQPIPGGATAKPFVTHHNALDMELFLRIAPELYLKRLVVGGFE
RVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVTQELLGTLDFTY
GGEPISFQRPWRRFTVKEAILEYGDIDAKSLEDRDLAYAYAQKIGLELPEDVGYGKLITE
IFEEVAETKLIQPTFITNYPTEVSPLSRKNDHDPDYVDRFEFFCAGREMANAFSELNDPR
DQKERFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRD
VILFPQLRKEAK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttgagcgagctgctgctgcagagaagacgtaaggtagatgcattgtgggag
gcggggatcaacccgtacccgaacgattacaggccgcagcacacctcggccgatctgcgc
gccgcctacggcgacaaggaagtcatcgaggagcagccgcagagcttcgtggtcgccggc
cgcatccttatgcgccgctctttcggcaaggcggcctttgtgcaggtgcaggaccgcaag
ggtcgcatgcagctctacgtcaagaaggacaccgtgggcgaggagctcttcgccgagttc
gaaaactacgacataggcgacatcatcggcgccaccggcacccctttccgcaccaagacc
ggcgagctttccttagccgtcagcgaactgcgccttctgaccaagtcgctattgccgctt
cccgagaagttccacgggctcaccgacgtggagacccgttaccgccagcgctacgtcgac
ctgatcgtctccccggacgtgcgcgaggtgttctacaagcgctcccgcgtcatccagctt
atccgcgatttcatgaccaggaacgacttcctggaagtggaaaccccgatgatgcagccg
atccccggcggcgccaccgcgaagccattcgtcacgcaccataacgcgctggacatggag
ctattcctgcgcatcgcccccgagctctacctgaaaaggctcgtggtcggcggcttcgag
cgcgtcttcgagatcaaccgcaacttcagaaacgaagggatctcggtgcgccacaacccc
gagttcaccatgatggagttctaccaggcctacgccaccttcgaggacctgatgaactac
accgaggagctcctctgccacgtgacccaggaacttctggggaccctcgacttcacttac
ggcggcgagccgatcagcttccagcgcccttggcgccgcttcaccgtcaaggaggcgatc
ctcgagtacggcgacatcgacgcgaaaagcctggaggaccgggacttggcctacgcctac
gcgcagaagatcggcctggaactccccgaggacgttgggtacggcaagctgatcaccgag
atcttcgaggaggtcgccgagaccaagctgatccagccgaccttcatcaccaactacccg
accgaggtctcgcccctttccaggaagaacgaccacgacccggactacgtcgaccgcttc
gagttcttctgcgccgggcgcgagatggccaacgccttctccgagctgaacgacccgcgc
gaccagaaggagcgcttcctggcccaggttgccgccaaggacaagggggacgaggaggcg
cactacatggacgaggactacatccgcgccctggagtacggccttccgccgacagccggc
gaggggatcggcatcgaccgcctggtcatgctcctgaccgactccccgtccatccgcgac
gtcatcctgttcccgcagctaaggaaagaggcgaaataa
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