Citrifermentans bremense: GEOBRER4_33220
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Entry
GEOBRER4_33220 CDS
T07006
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GEOBRER4_33220 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_33220 (ung)
Enzymes [BR:
gbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GEOBRER4_33220 (ung)
DNA repair and recombination proteins [BR:
gbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GEOBRER4_33220 (ung)
Prokaryotic type
GEOBRER4_33220 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCG48572
UniProt:
A0A6S6M2G6
LinkDB
All DBs
Position
complement(3818563..3819264)
Genome browser
AA seq
233 aa
AA seq
DB search
MEMTTERQIQLEPGWKSHMLEEFDKPYMLELKEFLRLELARKKTIYPKGSEYFNAFNSTS
FDKVKVVVLGQDPYHGPGQAHGLCFSVARGVEVPPSLVNIFKEIQADLGLAPGDFRHGNL
KSWAEQGVLLLNSVLTVEAGRAASHQGKGWEAFTDRAVSMLNDKKDHVVFMLWGSYAQKK
GGVIDEKRHLVLRAPHPSPLSAHRGFLGCRHFSQANAYLTRHGIDPIDWRLPA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacgacggaaagacagatacaactggagcctggctggaaatcacatatgctg
gaggaattcgataagccttacatgctggagctgaaggagttcctgcgcctggagttggcg
cgcaagaagaccatctatcccaaggggagcgagtacttcaatgccttcaactccacctcc
ttcgacaaggtgaaggtggtggtgctgggacaggacccttaccatgggccggggcaggca
cacgggctctgcttttcggtagcacggggggtggaggttccgccttcgctggtgaacatc
ttcaaggagatacaggcggacctggggctcgcacctggcgatttcaggcacggtaacctg
aaatcgtgggcggagcagggcgtcctcctcctgaacagcgtgctgactgtggaggcggga
cgcgcagcctcgcaccaggggaagggttgggaggcctttaccgaccgcgccgtttcgatg
ctcaacgacaagaaggatcacgtggtattcatgctctggggctcgtacgcccagaagaaa
ggcggcgtcatagacgagaagaggcacctggtcctgagggcaccgcatccctcccccttg
tcagctcaccgcggtttcctgggctgccggcacttctctcaggccaacgcctacctgaca
aggcacggcatcgacccgatcgactggcgcctccccgcctag
DBGET
integrated database retrieval system