Citrifermentans bremense: GEOBRER4_36540
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Entry
GEOBRER4_36540 CDS
T07006
Symbol
fliA
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
gbn
Citrifermentans bremense
Pathway
gbn02020
Two-component system
gbn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GEOBRER4_36540 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GEOBRER4_36540 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbn03021
]
GEOBRER4_36540 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gbn02035
]
GEOBRER4_36540 (fliA)
Transcription machinery [BR:
gbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEOBRER4_36540 (fliA)
Bacterial motility proteins [BR:
gbn02035
]
Flagellar system
Flagellar assembly proteins
Stator
GEOBRER4_36540 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7096
HrpB7
Motif
Other DBs
NCBI-ProteinID:
BCG48904
UniProt:
A0A6S6MB00
LinkDB
All DBs
Position
complement(4176827..4177579)
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AA seq
250 aa
AA seq
DB search
MNCLLKAYEQEAHRGVTQTRDELVVAHLPLVKFIVDRIASSLPPHLDRDDLRSAAVIGLI
SAAERFDHTRGVQFKTFAEQRIRGTIMDELRAQDWLTRSLRDKFKKLEREFSQLEQRLGR
NPSSDEVALAMGLELKDYFRLLEEIHLLSFVSLDDAWHDEDGAPFGLLDVLEDKGTESPQ
NQLIARQTVERLAEAIDNLPEKERIVITLYYYEELNLKEIGAVLDLTESRISQLHSQAII
RLRGKMKRTA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcttcttaaggcatacgaacaagaggcccaccgtggggtaacgcagaccagg
gacgaactggtggtagcacacctccccttggtcaaattcatcgtcgaccggatcgcttcg
tcgctccccccccatctggaccgcgatgacctgaggagcgccgccgtgatcgggctcatc
tcagcggcagagcgcttcgaccacacccgcggcgtacagttcaagaccttcgccgagcag
cgcatccgcggcaccatcatggacgagctgagggcccaggactggctcaccaggagcctc
agggacaagttcaagaaacttgagcgcgagttctcgcagctggagcagcgcctggggagg
aacccctcctccgacgaggtggcgctcgccatggggctcgagcttaaggactacttccgg
ctcctggaggagatccaccttctctccttcgtctcgctcgacgacgcttggcacgacgag
gacggcgcaccgttcggccttctggacgtgctcgaggacaaagggaccgagagcccgcag
aatcagctgattgcgcgccagacggtggagaggctggcagaggcgatcgacaacctcccc
gagaaggagaggatcgtcatcacgctctactactacgaggaactgaacctgaaggaaata
ggggcggtgctcgacctcaccgagtcgaggatctcgcaactgcacagccaggccatcatc
cggctgcgcggcaagatgaagcgcacagcctaa
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integrated database retrieval system
