Citrifermentans bremense: GEOBRER4_39220
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Entry
GEOBRER4_39220 CDS
T07006
Symbol
lysA_2
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00300
Lysine biosynthesis
gbn00470
D-Amino acid metabolism
gbn01100
Metabolic pathways
gbn01110
Biosynthesis of secondary metabolites
gbn01120
Microbial metabolism in diverse environments
gbn01230
Biosynthesis of amino acids
Module
gbn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GEOBRER4_39220 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEOBRER4_39220 (lysA_2)
Enzymes [BR:
gbn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GEOBRER4_39220 (lysA_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AtzH-like
SBSN_GxHH_rpt
Motif
Other DBs
NCBI-ProteinID:
BCG49172
UniProt:
A0A6S6M4B8
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All DBs
Position
complement(4450164..4451417)
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AA seq
417 aa
AA seq
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MHHFQYKGEELFAEDVAIKDIVAAVGSPVYIYSKATLERHYRAMDDAFAQAPHTICYSVK
ANSNLAVLKTFIKLGGGVDIVSGGELYRALAAGVDPKKVVYSGVGKRDDEIAYALENGIL
MFNIESEQELDRISEVAGRIGRKAGIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALE
QYQRAKGLANIEILGIDCHIGSQLTKVSPFVDAIKKLKRLLDGVRGMGIDIKYLDLGGGL
GIQYDDEAPPLPADYGSSIQEETKDLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKNF
VIVDAGMNDLARPALYGSFHGVRPVFRNQDGMIEGDIVGPICESGDFLVKEREFPNFRQG
DLIAFMSAGAYGFTMSSNYNSRPRAAEVMVDGDKFEVVRDREKLEDLVRGERVPSFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttccaatacaaaggtgaagagctgttcgcagaagacgtcgcgataaaggat
atcgtcgccgccgtcggcagtcccgtctatatctactcgaaggcgacgctggaaagacac
tacagggccatggacgatgccttcgcccaggccccgcacaccatctgctactctgtaaag
gccaattccaacctcgcggtgctgaagaccttcatcaaacttggtggcggggtcgacatc
gtctcgggaggggaactgtaccgcgctctcgccgcgggggtggatccgaagaaggtggtt
tactcgggcgtcggcaaaagagacgacgagatcgcctacgcccttgagaacgggatcctg
atgttcaacatcgagtccgagcaggaactggaccgcatcagcgaagtcgcgggacgtatc
ggccgtaaagcgggcatcgccatccgcgtcaaccctgacgtcgatccgcaaacccatccc
tacatcaccacgggcctcaaaaaagcaaagttcggcattaacatcgagcgtgccctggag
cagtaccagcgcgccaaggggctcgccaacatagagattctgggcatcgactgccatatc
ggcagccagctcaccaaggtctctcccttcgtcgacgccatcaagaagctgaagcggctc
ctggacggcgtgagggggatggggatcgacatcaagtatctcgacctgggtggcggtctt
ggcatccagtatgacgacgaagcaccaccgctgcctgcggattacggctcatccatccag
gaagagaccaaggatctcgggctgcacctaattttcgagccagggaggaacctagtaggc
aatgccggcattttggtcggcaaatgcctctacactaaaaaaggcgaggaaaaaaacttc
gtcatcgtggatgcagggatgaacgacctggcccgtccggctctctacggttccttccac
ggcgtcaggccggtcttccgtaaccaggacggcatgatcgaaggcgatatcgtcggtccc
atctgcgaatctggcgatttcctggtgaaagagcgcgaattcccgaacttccgccagggc
gacctgattgcgttcatgtccgccggagcctacggcttcaccatgagcagcaactacaac
agccgcccccgcgccgccgaagtgatggtcgacggggataagttcgaagtggtgcgcgac
cgggagaagctggaggacctggtccggggcgagcgtgtaccgtcctttctttga
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